KEGG   Vibrio atlanticus: VS_1650
Entry
VS_1650           CDS       T00812                                 
Name
(GenBank) putative Helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
vsp  Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsp03400]
    VS_1650
Enzymes [BR:vsp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VS_1650
DNA repair and recombination proteins [BR:vsp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VS_1650
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C Zn_ribbon_Top1 UvrD_C_2 Zn_ribbon_recom AAA_30 AAA_12 Phage_endo_I Rhodanese_C
Other DBs
NCBI-ProteinID: CAV18835
UniProt: B7VP86
LinkDB
Position
1:complement(1782304..1785189)
AA seq 961 aa
MTKLLLKTNFLAHLLGKRQQVNVNEDGITIFKDNIKTLYKWDTIVAPPVAKLGFSGGVLS
FETNDSGLSVPMLSYLFAHRHKHTFFPFWANSNVQKLIPFLEQVENASAESFIRTSETQS
FQTIANKEAKRWKGWRSALGLSELAQQVAQTLDVICAWKASDIENMRYAYVQKQLTEYGV
FFDNVESNPLTEKQRIACITDNDNNLLLAGAGTGKTSVMVGRTGYLINSDQATANDILLL
AYGRIAAKEMDERIKDKLGFDDVRASTFHSLGMKIIAEVEGSKPNLSPFEDDIKAKSKWM
NDNLEQLMLDDGYRGSLLEYFSSYYFVDKNPFEFQSEGEYLQYLTDNDIRSLKGDQVKSY
GEVVIANWLFRNGINYEYEASYRFDVSTEQYRQYHPDFYLPDHDIYIEYYGTDEHGNTAP
WIDKVRYQESIEWKRQTHKQYQTGYVEVFYHQHKVGKLLQVLENKLLEREVEFNPIPPQD
LLNNLRQLGQVTELAKLFSALVDMYKAACLDDIAIENVIRNSIDPKQTEKALELLYPLYN
RYELFLREKQWIDFNDMISKALMYVQTGQFVSSWKYILVDEFQDISEPRARLVKALRDSL
PGTSLFCVGDDWQAIYRFSGADVKLTTNFVEYFGATSETQLDLTFRFNSAIGDVATQFVT
RNPVQIKKDIQSLIKVNKPAVSILRQGRNEQGVSPLEKALNAVLACVHTSGKPAQNKVYL
LARFWHQMPDYTQLQEINRQYPSLEITCQSFHASKGKEADYVIIMGLTTGKHGFPSQKVT
PPLVDALLPKGDDYEFAEERRLFYVALTRAKHRAYLLVDMTDVSDFVIELIKKKYFVDTD
EFDASFVQKLFEQISCNSCKTGVLKERVSRYGKFLSCSFYPRCKHKETPCSHCGSPMSST
TKPGFQECINEECGDIRPLCKRCGSEMKLRNGKYGQFWSCSTYRKSADRNCGYTENMPAV
T
NT seq 2886 nt   +upstreamnt  +downstreamnt
atgacgaaacttctcctcaaaaccaattttttggcacaccttcttggcaagcgacaacag
gtaaacgttaacgaagacggtattaccatcttcaaagacaatataaaaacgttgtacaag
tgggatacgatagttgctcctccagtagccaaattaggcttttcaggtggcgttttgtcg
tttgaaacaaatgactccggtttgtccgttccgatgttgagttatctatttgcgcataga
cacaagcacactttctttcctttttgggccaacagtaacgttcagaaactgattccattt
ttggagcaagtggaaaacgcctctgccgaaagttttattagaacgtctgaaactcaaagc
tttcaaaccatcgcaaataaagaagcgaaaaggtggaaggggtggcggtcagctttaggg
ttaagcgaactagcccaacaggtcgctcagacactcgatgtgatttgtgcctggaaggcg
tcagatattgagaatatgcgctatgcctacgtccaaaagcagctaacagaatacggagtg
tttttcgacaacgttgaatctaacccgttaacagagaagcagcgaatcgcttgtattacg
gataacgacaacaatctacttttagctggagcgggtaccggtaaaacaagtgttatggtt
ggtagaactgggtatctgattaatagtgatcaagcgactgcaaatgatatcttgctgttg
gcttacggccgtattgcagctaaggaaatggacgagcgcatcaaagataaactgggtttt
gatgacgtgagagccagcaccttccatagcttgggtatgaaaattatcgctgaagttgaa
ggttcaaaaccaaacctatccccatttgaagacgacattaaagctaaatcaaaatggatg
aacgataacctagagcaactcatgcttgatgatggctaccgtgggtctttacttgagtac
ttcagctcgtattactttgttgataagaacccttttgagtttcaaagtgaaggtgagtat
ctacagtacttaactgacaatgacatccgttcgttgaaaggggaccaggtaaagagttac
ggtgaggttgtcattgccaactggttatttagaaacggaattaattatgagtatgaggcg
agctatcgatttgacgtaagtacagagcaatatcgtcaatatcacccagacttttattta
ccagaccacgacatctacattgaatactacggtactgatgagcacggtaatacagccccg
tggattgataaagttcgctatcaagagtcgattgaatggaaacgccaaacgcacaagcaa
taccagactggttatgttgaggtgttctaccaccagcataaagttggaaagcttcttcag
gtgcttgaaaataaattgttggagcgtgaagtcgaatttaaccccatccctccgcaggat
ttacttaataaccttcgccagttaggccaagtaacagaattggctaaattatttagtgct
ttggtggatatgtacaaagcggcttgccttgatgatattgcgatagagaacgtcattaga
aactcaatcgatcctaagcaaacagagaaagcattagagttgttgtatccactatacaat
cggtatgagctgtttctgcgcgaaaagcagtggatagacttcaatgacatgatcagtaaa
gcattgatgtatgtccaaaccggacagtttgtttcatcctggaaatacatcttagtagat
gagtttcaagacatctcagagcccagagctaggctagtcaaagcgttgcgtgattcactg
cctggtacgtcactattttgcgttggggatgattggcaggctatctatcgctttagtggc
gcggacgtaaagctgactactaattttgttgagtatttcggtgcgacttcggaaacacaa
ttggatttaacgtttcgttttaatagtgcgattggagatgtggcaacgcaatttgtcacc
agaaacccagtacaaatcaaaaaagacattcagtcccttattaaggttaacaagcctgct
gtatcgatcctcagacaaggcagaaatgaacaaggtgtatcgcccctagaaaaagcgcta
aatgctgttttggcttgcgttcatacctcaggtaaaccagcgcagaataaggtgtatctc
ctagccagattttggcatcaaatgcctgattatactcagcttcaagaaattaatagacaa
tacccatcactagaaattacttgccagtcattccatgcctctaagggtaaagaagccgac
tatgtcatcattatgggattaacaacgggtaagcacggcttcccgtctcaaaaagtaact
cctccgctggtggacgcgctattgcctaaaggggatgactatgaatttgccgaggaaagg
cggcttttttatgtcgctttgactagagcgaagcatagagcctacttgctagttgatatg
acagatgtcagtgattttgttatcgaactcataaagaagaaatacttcgtagataccgat
gaatttgatgcatcgtttgtacagaaactgtttgaacagatttcctgtaacagttgcaag
accggcgttttgaaagagcgtgttagtcgttacggtaagttcttgtcttgttcgttttat
cctcgctgcaaacataaagaaactccttgtagccactgtggcagcccgatgagcagtaca
actaagcctggctttcaggagtgcatcaacgaagagtgtggcgacattcgccctctctgc
aagcgttgtggaagtgagatgaagctaagaaatggcaagtacggtcagttttggagttgt
tcgacatatagaaagagtgcagatagaaattgtggttatacggaaaatatgcctgcggtc
acttaa

DBGET integrated database retrieval system