Vibrio atlanticus: VS_1834
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Entry
VS_1834 CDS
T00812
Name
(GenBank) Transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsp03000
]
VS_1834
Transcription factors [BR:
vsp03000
]
Prokaryotic type
Helix-turn-helix
Other families
VS_1834
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_29
Penicillinase_R
HTH_24
MarR
DUF3640
Motif
Other DBs
NCBI-ProteinID:
CAV19018
LinkDB
All DBs
Position
1:1975319..1976173
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AA seq
284 aa
AA seq
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MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDAMQVNR
AVDLLTQAKRISFFGLGASSAVAKDAQNKFIRFNIPITCFEDIVMQRMSCINCSDNDVIV
LISHTGRTKSQVEIANLARENGATVIAITAKDSPLDKASSLSISLDVPEDTDVYMPMASR
VVQMTVIDVLATGFTLRRGSGFRENLKRVKESLRDSRYEKYSQF
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattagaaaaaatacaaaaaaacctggaaaacttcagcaagtctgagcgtaag
gtagccgaagtaatcatggcttcccctcaaactgcaattcattctagcattgctacctta
gctaaaatggctgacgtgagtgagcctacagttaaccgcttctgtcgtcgtttagacaca
aagggcttccctgactttaaacttcacctagctcaaagcttggcgaacggtacaccttac
gtgaaccgtaatgttgaagaagatgacggcccagatgcttacacgcataagatttttgaa
tcaactatggcttgtctagatgttgctaaaaacagtttagacgcgatgcaagtaaaccga
gcggttgacctgctgactcaagcaaaacgcatttcgttcttcggactgggtgcctcttct
gctgtagccaaagatgctcaaaacaaattcattcgtttcaatatcccaatcacttgtttc
gaagacatcgtgatgcaacgcatgagctgcattaactgcagtgataacgatgttattgtt
ctgatctctcacactggccgcactaaaagccaagtagagattgcgaacttagctcgtgaa
aacggggcgacagttatcgctatcacagcaaaagactctccgctagataaagcgagttct
ctgtctatctcattggatgtaccggaagacactgacgtttacatgccaatggcaagtcgt
gttgttcagatgacggttatcgatgtgttagcaacaggctttacgcttcgtcgtggttct
ggcttccgagagaacctgaaacgagtaaaagagtcgcttcgtgattcacgttacgaaaag
tactctcagttctaa
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