Vibrio atlanticus: VS_1919
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Entry
VS_1919 CDS
T00812
Name
(GenBank) conserved hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vsp01002
]
VS_1919
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsp01011
]
VS_1919
Peptidases and inhibitors [BR:
vsp01002
]
Cysteine peptidases
Family C82
VS_1919
Peptidoglycan biosynthesis and degradation proteins [BR:
vsp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VS_1919
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
Motif
Other DBs
NCBI-ProteinID:
CAV19102
UniProt:
B7VGQ2
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All DBs
Position
1:complement(2062213..2063769)
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AA seq
518 aa
AA seq
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MVMGLSMLAKYFCGLLVLVSVHAWSYTSSDESRFIPADSELSFMLIYPELTQSIYQDSSL
PILWDSPELVKAFEFQLSLLEQAQMAPLFDRQLKQIRQYQSRGQWQELDILLTDTFIYYL
SYIENAPLAGKEWYFSGKLHSKLPAPSPHILMRLKSSVTNDYLLEMVLSYAPPVGDFDQF
KATYSVLETASELNIERYRQKGLKRLGDPLSDKPILVERIALVGVDTSMIAVDFPVFDQD
LQTAIKSFQRMHGLTDDGIVGPDTIKWINMSFDERLTSLALNAERVRLWPRDRDSLIVVN
VPSFDMKYWEDGEEVFESKVVVGRKSRKTPLLEINLDSVILNPTWNVPWKIMVKDILPKV
KADESYLETHNFQVIDGWRTMETVDTTDIDWQTINFNSFPYRMRQQAGSRNALGLYKFNT
PNKRAIYLHDTPSKGLFNDDFRAYSSGCIRVEHAEELAELLFATKVRKVPNQSNDLAPNT
KVRLKKRIPVHIIYQTVLFEEGGIQYRGDIYQYDKEGG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
ttggtgatggggttaagcatgttagcaaaatacttctgtggattattggtgttagtttct
gtgcatgcatggagctatacgagttctgacgagagccgatttattccggctgattcagag
ctctcttttatgctgatttatccagagcttacccaaagtatttatcaagactcatctctt
ccaattttgtgggattcgcctgaacttgttaaggcgtttgaatttcaattgtcgctttta
gaacaagcacaaatggcgcctctttttgatcgtcagttaaaacaaatccgccagtatcaa
tctcgtggtcaatggcaagaattggatatcttgttaaccgacacctttatctattaccta
agctatattgagaatgcaccacttgccggtaaagagtggtatttctcgggcaagctgcat
tccaagttgcctgcgccttctccacatatcctgatgagattgaaaagcagtgtcaccaac
gattacttattagaaatggtattgtcctatgcgccgcctgttggggattttgaccaattc
aaggcgacctactccgtgctagaaactgcgtctgaactcaatatagagcgatacagacag
aaaggattgaaacgcttaggtgacccgctttcagacaaacctattcttgttgagcgcatt
gctttggttggtgttgatacctcgatgatcgcggtcgatttccctgtatttgaccaagat
ctgcaaacagcgattaagtcttttcagcgaatgcacggccttacagacgatgggatcgtt
gggccggatacgatcaaatggatcaacatgagctttgatgaacgattgacttcgctggct
ctcaatgccgaacgtgttcgtttgtggccaagagacagagactctctcatcgtcgtcaat
gtccctagttttgatatgaagtattgggaagatggtgaagaggtctttgagtccaaagtt
gtcgtgggcagaaagtcgcgaaaaacaccgcttttagagataaacctagattcggttatc
ttaaatcctacttggaacgtaccatggaaaatcatggtcaaagacatcttgcctaaagta
aaagcggatgaaagctacctagagacacacaacttccaagtgattgatggttggcgcacc
atggaaaccgtcgacaccacagatatcgattggcagaccatcaatttcaattcgttccca
tatcgaatgcgtcaacaggcaggctcacgtaatgcactaggtttgtacaagttcaacaca
cccaacaagcgagctatctatctgcacgatacgccaagtaaaggcctgtttaatgatgac
ttccgtgcttacagttcaggttgtatacgtgtcgaacatgcagaggaattggctgaattg
ttgtttgccaccaaggtaaggaaagtacctaaccaaagtaacgatcttgctcctaatacc
aaggttcgtctcaagaagcgaatccctgtgcatatcatctatcaaaccgtgctgtttgaa
gaagggggcatacagtatcgtggtgacatctaccaatatgataaagagggtggttaa
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