Vibrio atlanticus: VS_1936
Help
Entry
VS_1936 CDS
T00812
Name
(GenBank) DNA gyrase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsp03032
]
VS_1936
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_1936
Enzymes [BR:
vsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VS_1936
DNA replication proteins [BR:
vsp03032
]
Prokaryotic type
DNA Topoisomerases
VS_1936
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VS_1936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CAV19119
UniProt:
B7VGR9
LinkDB
All DBs
Position
1:complement(2078797..2081469)
Genome browser
AA seq
890 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAGELLTDLDKDTVDFVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVVDGCLAFINNEDITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKV
YMRSRAEIETEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYSQTQLQTTFGINMVALNNGQPQLFNIKDMLKCFVDHRREV
VTRRTIFELKKARDRAHILEALSLALANIDEIIELIKNAPTPAEAKVGLVSRGWDLGNVA
SMLERAGTDAARPDWLEDQYGIRDGQYFLTETQAQAILELRLHRLTGLEHEKILDEYKAL
LEEIAELMHILASTERLMEVIREELEAVRDIYGDERRTEITAAVHDIDMEELIAQEDVVV
TLSNAGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPQASRTARGKPIVNILPLEEGERITAILPVSEFSNEKFIFMATGDGTVKKTSLD
QFANVRANGLIAVNLRDDDSLIGVDITDGNSDIMLFSKSGKVVRFNEDKVRPMGRTASGV
RGMKLPEDDQVVSLIVPSNEGDILTVTQNGYGKRTELAEYPTKGRATQGVVSIKVSDRNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDENVVGLQRIDE
VEEAEIVEGEETEEANADAVNAETADVSESSEEQASDASDSESDSEQDTE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagcgaaagagatcacgcccgtaaatattgaagatgagcttagaggttca
tacctagactacgcgatgtccgtcatcgttggtcgtgcccttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttgttcgcgatgaatgtattaggtaatgattggaac
aaagcatataaaaagtctgctcgtgtagtaggcgatgtaatcggtaaatatcacccacac
ggtgatagtgcggtatacgagtcaattgttcgtatggctcagccgttttcactacgctat
atgttagtcgatggccaaggtaactttggttcggttgacggcgattcagctgcggcaatg
cgttataccgaagttcgtatgtcaaaaatagctggtgagctattaacggatcttgataaa
gatacggttgacttcgttcctaactatgatggaaccgagcaaataccagcagttttacca
acaaaaataccaaacctattggttaacggtgcttctggtatcgcagtaggtatggctacc
aacatcccgccacataaccttggcgaagttgttgatggctgtttagcatttatcaataat
gaagacatcactattgatgagctaatggactacatcccgggtccagacttcccgacagca
gcattaatcagtggccgtaagggcattgtcgatgcatataagactggccgaggcaaagtc
tacatgcgctcgagagctgaaattgaaacggaaaagaacggtaaagaaactattatcgtt
actgaaattccgtatcaagtgaacaaagctcgtctgatcgagaagattgcagaacttgta
aaagacaagaaagttgaaggcatcagtgcactgcgtgacgaatctgataaagatggtatg
cgtattgttattgaatgtaagcgtgatgctgtcggtgaagttgtactaaacaacctttac
tcacaaactcaactgcaaacaactttcggcatcaacatggttgctctgaacaacggccaa
ccacaacttttcaacattaaagatatgttgaagtgttttgttgatcaccgtcgtgaagtt
gtgacacgtcgtactatcttcgaattgaagaaagcgcgcgaccgtgcacatatcttggaa
gctctatctttagcgcttgcaaacattgatgaaatcattgaactgatcaagaacgcacca
acaccagcagaagctaaagtcggtctagtatctcgtggttgggatcttggtaacgttgca
tcaatgcttgaacgtgctggtactgatgcagctcgtccagattggcttgaagaccaatac
ggtatccgtgatggtcaatacttcctaacggaaactcaagcgcaagctattctagaactt
cgtcttcaccgcctaactggccttgagcacgagaagattctagacgaatacaaagcactt
ctagaagagatcgctgagctaatgcatatccttgcaagcactgagcgtttgatggaagtt
atccgtgaagaacttgaagcggtacgtgatatctatggcgacgaacgtcgtacagaaatc
acagcagcggttcatgacatcgacatggaagagctaatcgctcaagaagacgtggtagta
acgctttctaacgcaggttacgttaagtaccaaatcctaagcgactacgaagctcagcgt
cgtggtggtaaaggtaagagtgcaactaagatgaaagatgaggattacattgagcgtctg
cttgttgctaatactcacgataacatcttatgtttctctactcgtggtaaaacgtaccgc
ctgaaagtttaccaactgcctcaagcaagccgcaccgctcgtggtaagcctatcgttaac
attcttcctctagaagagggtgagcgtattacggctatcctgcctgtttctgagttctct
aacgagaaattcatcttcatggcaacaggcgacggtaccgttaagaagacatcactggat
caattcgcaaacgtacgtgctaacggcctaatcgcagttaacctacgtgacgatgattca
ctgattggcgttgatattactgacggtaatagcgacatcatgctgttctcgaagtcgggc
aaagttgttcgctttaacgaggacaaagtacgtccaatgggtcgtactgcctctggtgtt
cgtggtatgaagcttccagaagacgatcaagtggtttcactgattgttccttcaaacgaa
ggcgatatcctaactgtgactcaaaacggttacggtaagcgtactgagctggctgaatac
ccaacgaaaggccgtgcaacgcaaggtgtagtatctatcaaagtctctgatcgtaatggc
ccagtagttggtgctgttcaggttgaagaaggcgatgaaatgatgatgatcaccgacgca
ggtacacttgtacgtactcgcgtagcggaagtaagccaagttggtcgtaacactcaaggt
gtaacactgattcgtactgctgaagacgagaatgttgtaggtctacaacgtatcgacgaa
gtagaagaagcggagattgttgaaggcgaagaaactgaagaagcaaatgctgacgcagta
aacgctgaaacggctgatgtttctgaatcaagtgaagagcaagcatctgatgcttctgac
tctgaaagtgatagcgagcaagacactgagtaa
DBGET
integrated database retrieval system
