Vibrio atlanticus: VS_2032
Help
Entry
VS_2032 CDS
T00812
Name
(GenBank) Probable tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
VS_2032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsp03016
]
VS_2032
Enzymes [BR:
vsp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
VS_2032
Transfer RNA biogenesis [BR:
vsp03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
VS_2032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
DUF7411
ATP_bind_3
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
CAV19208
UniProt:
B7VH08
LinkDB
All DBs
Position
1:2178009..2179145
Genome browser
AA seq
378 aa
AA seq
DB search
MSDISSGNSEKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYCTAAEDL
ADAQAVCDKLGIHLHTINFAAEYWDNVFEYFLEEYKAGRTPNPDILCNKEIKFKAFLEFA
DEVLDADYIAMGHYVRRTFPTQEELDAGAKPEMLRGLDGNKDQSYFLYTLSSDQVARSLF
PVGELEKPEVRRIAEEQDLITAKKKDSTGICFIGERKFTEFLGKYLPAQPGNIETPEGQV
IGQHQGLMYHTLGQRKGLHIGGTKGGGGNEEPWFVGEKDLKRNVLIAVQGKDHPLLKSEG
LIASQLHWVNRTPITEVMTCTVKTRYRQTDIPCTIIPIDDENIKVIFDEPQIAVTPGQSA
VFYLDNVCLGGGIIEKRI
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatcagctctggaaacagcgaaaagaaagtaattgtcggtatgtccggcggt
gtagattcgtcagtatcggcgtatcttcttcagcaacaaggctatcaggtagaaggcctt
ttcatgaaaaactgggaagaagacgataacgaagaatactgcacggcagctgaagacctt
gctgatgctcaagcggtatgtgacaagttaggtatccaccttcacactatcaactttgca
gcagagtactgggataatgtattcgagtactttctggaagaatacaaagcgggtcgtaca
ccgaacccagatatcctttgtaacaaagaaatcaaattcaaagcattcttagagtttgcg
gatgaagtattagacgcagactacatcgcgatgggtcactatgttcgtcgtactttccca
acacaagaagagctagacgctggtgcgaagccagaaatgctacgcggcctagacggcaat
aaagaccaaagttatttcctttatacgctaagctcagatcaagtggcacgcagcctattc
cctgtgggtgaattagagaagccagaagtacgacgtattgctgaagagcaagacttgatc
actgcgaaaaagaaagattcaacaggcatctgctttattggtgagcgcaagttcactgag
ttcttaggcaaatacctacccgctcaaccgggaaacatcgagacaccagaaggccaagtt
attgggcaacaccaaggcttgatgtaccacacactaggccaacgtaaaggcctgcatatc
ggtggcaccaaaggtggcggcggtaatgaagaaccatggtttgttggtgaaaaagatctt
aaacgtaatgttctgatcgcggtacaaggtaaagaccaccctcttttaaaatcagaaggt
ttgatcgcttctcagcttcattgggttaatcgcacaccaattactgaagttatgacgtgc
acggtaaaaacacgttaccgtcagaccgatattccttgtacaatcatcccaattgatgat
gagaacattaaggttatttttgacgaaccacaaattgcggtgaccccaggtcaatcagca
gtgttctacctagacaacgtatgtcttggtggtggtatcattgaaaagcgcatctaa
DBGET
integrated database retrieval system
