Vibrio atlanticus: VS_2220
Help
Entry
VS_2220 CDS
T00812
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00061
Fatty acid biosynthesis
vsp00071
Fatty acid degradation
vsp01100
Metabolic pathways
vsp01212
Fatty acid metabolism
vsp02024
Quorum sensing
vsp04146
Peroxisome
Module
vsp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VS_2220
00071 Fatty acid degradation
VS_2220
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VS_2220
09145 Cellular community - prokaryotes
02024 Quorum sensing
VS_2220
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vsp01004
]
VS_2220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vsp04147
]
VS_2220
Enzymes [BR:
vsp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VS_2220
Lipid biosynthesis proteins [BR:
vsp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VS_2220
Exosome [BR:
vsp04147
]
Exosomal proteins
Exosomal proteins of breast milk
VS_2220
Exosomal proteins of breast cancer cells
VS_2220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
CAV19384
UniProt:
B7VI14
LinkDB
All DBs
Position
1:complement(2385355..2387049)
Genome browser
AA seq
564 aa
AA seq
DB search
MDKPWLSRYPSDVPETINPDQYQSLIEMFEQSVQKFADQPAFENMGSIMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPIALFGVLRAGMIAVNVNPLYTPRELEHQLNDS
GAKAIVIVSNFASTLEKVVDKTPVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISFRKALYKGRRLQYVKPFMAGDDIAFLQYTGGTTGVAKGAILTHRNMIANVLQAKG
AYSPVLQEGRELVVTALPLYHVFALTVNCLLFVEMGGRNLLITNPRDIPGFIKELQKVPF
TAITGVNTLFNALVNNEDFHELDFSNMRLSVGGGMAVQRAVAEQWKKATGVHLLEGYGLT
ECAPLVTGNPYDLKDYTGAIGLPVPSTEVRIVDDEGKVVGNDQVGELQVRGPQVMQGYWQ
RPEATKEVIDQDGWLSTGDIVKFDDEGLLYIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQPHEVSGELVKIYVVKRDPSLTKEDIIAHCREHLTGYKIPKLIEFREELPKT
NVGKILRRVLREENDAELAKRASE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccttggctttcacgttatccaagtgacgtaccagaaacgatcaacccagat
cagtaccaatctctcattgaaatgtttgaacagtcggtacagaagttcgccgaccaacct
gcattcgagaacatgggatcgattatgacattccgtaagcttgaagagcgcagtcgtgct
tttgctgcttacttgcagaatgatctaaaactgaagaaaggcgatcgtgtcgcgctgatg
atgccaaacttgctgcaatacccaattgcactgtttggtgtgctgcgtgcaggtatgatt
gctgtgaacgtcaacccactgtacacgcctcgcgaacttgaacaccaactgaatgactct
ggtgcaaaggcgattgttatcgtttctaactttgcgagcacactagagaaagtcgttgat
aaaactccggttaaacacgttgtactcactagccttgggcaaatgttgccacgagcgaaa
ggtacgattgtcgacttcgtagtgaaatacgtgaaagggatggtgcctaagtacgatcta
ccgggtgccatttcattcagaaaggcactttacaaaggccgtcgtcttcaatatgtgaag
ccgtttatggcgggtgatgacatcgcattcctacagtacacaggtggtacaacgggtgta
gcgaagggcgcaattctaacgcaccgcaatatgattgcgaacgtacttcaagctaaaggg
gcatacagccctgtgctacaagaaggccgtgaattggtggtaacggcattgccgctttac
cacgtatttgcattgacagtgaactgcttactgtttgttgagatgggtggtcgtaacctt
ttgattactaaccctcgtgacattcctggctttattaaagaactacaaaaagttccgttt
accgcgattactggcgtaaacaccttgttcaatgcgctagtgaataacgaagatttccac
gagttggatttcagtaacatgcgtttatctgttggcggcggtatggcggttcaacgcgct
gttgctgagcaatggaagaaagcgacaggtgtccacctacttgaaggctatggtttaact
gaatgtgctcctttggtcacaggtaacccatacgatttgaaagactatacgggtgcaatc
ggcctgccagtaccatcaacagaagttcgtattgttgatgatgaaggtaaagtggttggc
aatgaccaagtgggtgaattgcaggtccgtggtcctcaagtgatgcaaggttactggcag
cgtccagaagcgaccaaagaagtgatcgatcaagacggttggctatcgacaggtgacatc
gttaagtttgatgatgaaggcttgttgtacatcgttgaccgtaagaaagacatgattcta
gtgtcgggcttcaacgtttacccgaacgagattgaagatgttgtggctctgcatggcaaa
gtgttagaagttgcggctatcggtcaacctcatgaagtgtcaggtgagttggttaagatt
tacgttgtgaaacgtgacccgagcctaaccaaagaagacattatcgcgcactgtcgtgaa
cacctaacgggctacaagatccctaaattgattgagttccgtgaagaactaccaaaaacc
aatgtaggcaaaatcttgcgccgagtgcttcgtgaagagaacgatgctgagcttgctaaa
cgcgcaagcgagtaa
DBGET
integrated database retrieval system
