Vibrio atlanticus: VS_2246
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Entry
VS_2246 CDS
T00812
Name
(GenBank) putative succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00020
Citrate cycle (TCA cycle)
vsp00190
Oxidative phosphorylation
vsp00650
Butanoate metabolism
vsp00720
Other carbon fixation pathways
vsp01100
Metabolic pathways
vsp01110
Biosynthesis of secondary metabolites
vsp01120
Microbial metabolism in diverse environments
vsp01200
Carbon metabolism
Module
vsp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vsp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vsp_M00149
Succinate dehydrogenase, prokaryotes
vsp_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VS_2246
00650 Butanoate metabolism
VS_2246
09102 Energy metabolism
00190 Oxidative phosphorylation
VS_2246
00720 Other carbon fixation pathways
VS_2246
Enzymes [BR:
vsp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VS_2246
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
Thi4
FAD_binding_3
Lycopene_cycl
FAD_oxidored
OPA3
Motif
Other DBs
NCBI-ProteinID:
CAV19409
UniProt:
B7VI39
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All DBs
Position
1:complement(2413930..2415588)
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AA seq
552 aa
AA seq
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MTIPVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDHWEQHMYDTVKGSDYIGDQDAIEYMCKNGPESVIELEKMGLPFSRFDNGSIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTVFSEWYALDLVKNEDGAILGT
TALCMETGEVCYFKAKATILATGGAGRIYASTTNAHINTGDGVGMAIRAGVPMQDIEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREG
RGCDGPWGPHIKLKLDHLGKETLESRLPGVCELSRTFAHVDPVKEPIPVIPTCHYMMGGV
PTQVSGQAIKQTEDGTDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLNKQAEAKPASEADIERSLERYNRWENSTDGEDPAVIRKDLQQCMQNNFSVFREGKAM
ADGLEELKVIRERLKNAHLSDKSTEFNTQRIECLELENLMETAFATAVAANFRTESRGAH
ARFDFPDRDDER
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgactattcctgttcgtgagtttgatgctgtagtaattggcgctggtggtgctggtatg
cgcgccgcgctacaaatttctgagcaaggcctatcttgtgcgttgctttctaaagttttc
ccaactcgttctcatactgtatctgcgcaaggtggtatcaccgttgctcttggtaatgcg
catgaagatcactgggaacaacacatgtacgatacggtaaaaggttctgattacatcggc
gaccaagatgctatcgaatacatgtgtaaaaatggtcctgagtcggttatcgaactagaa
aaaatgggtcttccattttctcgttttgataacggcagtatttaccaacgtccgtttggt
ggccaatctaagaattttggtggtgagcaagcggctcgtaccgcagcggcagccgaccgt
actggtcacgcactgttacacacgctttaccaacaaaacattaaacacaaaacgacggtt
ttctctgagtggtatgcactggatcttgttaaaaacgaagatggtgcaatcttaggtact
accgcgctttgtatggagacgggtgaggtttgctacttcaaagcgaaggcaacaatcctt
gctactggtggtgctggtcgtatttacgcatcaacaaccaatgctcacattaacactggt
gacggtgttggcatggcgattcgtgctggcgttccaatgcaagacatcgaaatgtggcag
ttccacccaacgggtatcgctggcgcaggtgttttggtaacagaaggttgtcgtggtgaa
ggtggttaccttctcaataaagacggcgagcgcttcatggaacgttatgctccgaatgct
aaagatttagcaggtcgtgatgttgtagctcgttcgatgatggttgagattcgtgaaggt
cgtggttgtgatggtccatggggtccacacatcaagctgaaactcgatcacctaggtaaa
gagacgcttgaatctcgtctaccgggtgtatgtgagctttctcgtacgttcgctcacgtt
gatcctgttaaagaaccaattcctgtaatcccaacgtgtcactacatgatgggtggtgtt
cctacacaggtttctggtcaagcaattaaacaaactgaagacggtacagacgttgaaatt
caaggtctattcgcttgtggcgaaatcgcttcagtatccgtacacggtgcaaaccgtcta
ggtggcaactcgctacttgatttggttgtgttcggtcgtgcgacaggtcttcaccttggt
gagactttgaacaaacaagctgaagcaaaacctgcatctgaagctgacattgaacgttca
ctagagcgctacaatcgttgggaaaacagtactgacggtgaagatcctgcggtaattcgt
aaagaccttcagcaatgtatgcagaacaacttctctgtattccgtgaaggtaaagcgatg
gctgacggcttagaagagctgaaagtgattcgtgagcgtcttaaaaatgcacacctttca
gacaagtcgactgagttcaacacgcaacgtattgagtgtttagagcttgaaaacttgatg
gaaacggcattcgcaaccgcggttgcagcaaacttccgtacagagagtcgtggagcgcat
gctcgtttcgacttcccagatcgtgatgatgaacgatga
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