Vibrio atlanticus: VS_2324
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Entry
VS_2324 CDS
T00812
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp03030
DNA replication
vsp03430
Mismatch repair
vsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VS_2324
03430 Mismatch repair
VS_2324
03440 Homologous recombination
VS_2324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsp03032
]
VS_2324
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_2324
Enzymes [BR:
vsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VS_2324
DNA replication proteins [BR:
vsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VS_2324
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VS_2324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DAM-like-phage2
Motif
Other DBs
NCBI-ProteinID:
CAV19486
UniProt:
B7VIP0
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All DBs
Position
1:complement(2492966..2493733)
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AA seq
255 aa
AA seq
DB search
MNTSSTPEQNTNEKNSSDENKRIIVLDTETTGMNTEGGPHYMGHRIVEIGAVEIINRKLT
GRHFHVYIKPDRAIQEEAIGVHGITDEFLIDKPEYQDIHKEFLDFIKGAELVAHNAPFDT
GFMDYEFEKLNPAIGKTDDYCKVTDTLAMAKKIFPGKRNNLDILCDRYGIDNSHRTLHGA
LLDAEILADVYLLMTGGQTSLQFNAGQQEGEGESIRRAESGRKSLKVLRATADEVEAHQS
RLDLVEKSGSCLWRQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagtagcactccagaacaaaacacgaacgaaaaaaacagttcggacgaaaat
aagcgcatcattgtactcgataccgaaaccaccggtatgaatacagaaggtggccctcac
tatatggggcatcgcatcgttgaaattggtgcggtagagatcatcaaccgtaagctgacc
gggcgtcactttcacgtctatatcaagcccgatcgtgcgattcaagaagaggcaattggc
gttcacggtattaccgatgaatttttgattgataaaccagaataccaagacatacataaa
gagtttctcgactttattaaaggtgcggagctggtggctcataacgcgcccttcgatacg
ggctttatggactatgagtttgagaaacttaaccctgctataggtaaaacggatgactac
tgtaaagttaccgataccttggcgatggcgaagaagattttcccagggaaaagaaacaat
ctagatatcttatgtgaccgttatggtattgataactcacaccgtactcttcacggcgca
ttgctcgatgcggagattctagctgacgtctacttattgatgacaggtgggcaaacttcg
ctgcaatttaacgctggccaacaagaaggcgaaggcgaaagcatacgaagagcagaaagt
ggtcgaaaatccctaaaggttttgcgagctacggccgatgaagtagaagcgcatcaaagt
cgtttagacctcgtcgagaaaagcggaagctgcctctggcgtcagtag
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