Vibrio atlanticus: VS_2373
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Entry
VS_2373 CDS
T00812
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00260
Glycine, serine and threonine metabolism
vsp00460
Cyanoamino acid metabolism
vsp00630
Glyoxylate and dicarboxylate metabolism
vsp00670
One carbon pool by folate
vsp00680
Methane metabolism
vsp01100
Metabolic pathways
vsp01110
Biosynthesis of secondary metabolites
vsp01120
Microbial metabolism in diverse environments
vsp01200
Carbon metabolism
vsp01230
Biosynthesis of amino acids
vsp01240
Biosynthesis of cofactors
vsp04981
Folate transport and metabolism
Module
vsp_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VS_2373
09102 Energy metabolism
00680 Methane metabolism
VS_2373
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VS_2373
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VS_2373
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VS_2373
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VS_2373
Enzymes [BR:
vsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VS_2373
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CAV19533
UniProt:
B7VIT7
LinkDB
All DBs
Position
1:complement(2539700..2540950)
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AA seq
416 aa
AA seq
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MLKRDMNIADYDADLFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDKVETLAIERACELFGAQYANVQPHSGSQANNAVYMALLNAGDTVLGMS
LAHGGHLTHGSPVNFSGKLYNIIPYGIDEAGQIDYEEMEALAIEHKPKMIIGGFSAYSQI
CDWARMREIADKVGAYFFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
SNEGEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKEYQARVVANAKAMVAE
FLARGYNIVSGSTENHLFLVDLIDKDITGKEADAALGSANITVNKNSVPNDPRSPFVTSG
IRIGSPSITRRGFSEADAKELAGWMCDILDNMGDESVIEATKAKVLNICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgacatgaacattgctgattacgatgcggacctattcgcagctatccaa
gaagaaactcttcgtcaggaagagcacatcgaacttatcgcttcagaaaactacacaagc
ccacgtgtaatggaagctcaaggttctcaacttacaaacaaatacgctgaaggctaccct
ggtaagcgttactacggtggttgtgagttcgtagataaagttgaaactctagcaatcgaa
cgtgcatgtgaactgtttggcgctcaatacgcgaacgtacaacctcactcaggttctcaa
gcaaacaacgctgtatacatggcactactgaatgctggcgatactgttctaggtatgagc
ctagcgcacggtggtcacctaactcacggttctccagtaaacttctctggtaagctttac
aacatcatcccttacggtatcgatgaagcaggtcaaatcgattacgaagagatggaagcg
ctagctatcgagcacaaacctaagatgatcatcggtggtttctctgcttactctcaaatt
tgtgattgggcgcgcatgcgtgaaatcgctgacaaagtaggtgcttacttcttcgtagat
atggctcacgttgcgggtctaatcgctgcaggcgtttacccgaacccagttccacacgct
cacgttgttacaacaacaacgcacaaaacgcttgctggtcctcgtggtggtcttatcctt
tctaacgaaggtgaagatctttacaagaagctaaactcagcagtattcccaggcggccaa
ggcggtcctctaatgcacgttatcgctggtaaagcagtagcgttcaaagaagctctagaa
ccagagttcaaagaataccaagctcgcgttgttgctaacgcaaaagcaatggttgctgaa
ttcctagcacgcggttacaacatcgtttcaggttctacagagaaccacctgttcctagtt
gacctaatcgacaaagacatcacaggtaaagaggctgatgcagcactaggttcagctaac
atcacagttaacaagaactcagttccaaacgatccacgtagcccattcgttacttctggt
atccgtatcggttctccttctatcactcgtcgcggtttctcagaagcagacgcgaaagag
ctagcaggttggatgtgtgacatcctagataacatgggtgatgagtctgttatcgaagca
actaaagcgaaagtactaaatatctgtaagcgtctacctgtttacgcataa
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