Vibrio atlanticus: VS_2405
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Entry
VS_2405 CDS
T00812
Name
(GenBank) Geranyltranstransferase (Farnesyl-diphosphate synthase)
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00900
Terpenoid backbone biosynthesis
vsp01100
Metabolic pathways
vsp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
VS_2405
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vsp01006
]
VS_2405
Enzymes [BR:
vsp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
VS_2405
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
VS_2405
Prenyltransferases [BR:
vsp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
VS_2405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HetR_C
Motif
Other DBs
NCBI-ProteinID:
CAV19564
UniProt:
B7VJA0
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All DBs
Position
1:2574522..2575406
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AA seq
294 aa
AA seq
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MIETLLSYQARNNEQLNLWLDRLPHQNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCT
AEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILTGDALQTLAF
TILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKT
GALMKSAIRLGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTETLGKPQGSD
QDLNKSTYPSLLGLEGAQEKAQTLLQEALQALAAIPYNTQLLEEFARYVIERKN
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagacgttattgtcttatcaagcacgtaataacgagcaacttaacctttggctt
gatcgcctgccacaccaaaatcagaatctcattaacgcgatgcgttatgggttactttta
ggcggcaaacgcgcacgtccgtttcttgtctacattacaggggaaatgctcggttgcact
gcggaagaactcgacactccagcttcagcaatcgaatgtattcatgcctattctctgatt
cacgacgaccttccagcaatggacgacgacgaattgcgtcgtggccatcagacttgtcac
attaaatacgatgaagcaacggcaattttaactggcgatgcactacaaactctcgcgttt
actatacttgcggaaggcacattaagtgctgacggggaaagcaatcgcgttcgaatgatt
caacgcctagcagaagcgtctggtgcacaaggtatgtgtattggacaagctcttgatatt
gaagctgaaaaccgctctgtcacgctagaggagttagaagaagttcaccgtaacaagact
ggtgctctaatgaagagtgcgattcgtttaggtgctctagctgctggcgaaaaagcgttc
gaagtgatgcctcaattagataagtacgccgatgcaatcgggttagccttccaagttcag
gatgatattttagatatcattagcgataccgaaactttgggtaaaccacagggctctgac
caagatttgaacaaaagcacctacccttctttgttaggtttagagggcgctcaagaaaaa
gcgcaaactctgctacaggaagcgcttcaagctttggctgcaatcccatacaatacccag
ttactcgaagagttcgcccgatacgtcatcgagcgcaagaactaa
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