Vibrio atlanticus: VS_2456
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Entry
VS_2456 CDS
T00812
Name
(GenBank) Predicted ATP-dependent serine protease
KO
K04485
DNA repair protein RadA/Sms
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_2456
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VS_2456
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
GvpD_P-loop
SLFN-g3_helicase
AAA_22
AAA
Rad51
RecA_N
AAA_14
AAA_16
ABC_tran
nSTAND_NTPase5
NTPase_1
nSTAND3
Zeta_toxin
Viral_helicase1
Zn_ribbon_Thio2
AAA_29
AAA_24
AAA_5
Zn_ribbon_8
cobW
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
CAV19615
UniProt:
B7VJF1
LinkDB
All DBs
Position
1:complement(2624472..2625851)
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRLAASPQVARNERLSGYAGGATES
SVQTLSEIDLQEVPRFSSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCQLSS
QLPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQVAEREQPKIMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFLVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRALPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKRAIVPAANMPKGGIPGMQIHGVKKLSEAINAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcaaagcgagcttatgtgtgtaatgactgtggtgctgactttccacgttgg
caagggcagtgcaatgcatgtggtgcttggaacacgattacagaagttaggttagccgct
tcacctcaggtcgcgcgcaatgaacgactaagtggttacgctggtggtgcaactgaatct
tcggttcaaacgctatcggaaatcgacttgcaagaggtcccgcgctttagtagtggcttc
aaagagcttgatcgtgtacttggtggtggtgttgtacctggcgctgcgattcttattggt
ggtaaccctggtgccggtaaatcaacgctgttattgcagactatgtgtcagctttcttcc
cagttaccgacactttatgtcactggcgaagaatctcttcaacaagttgcgatgcgagca
tctcgattagggttaccaaaagagcatctcaaaatgctctctgaaaccaatgttgataaa
atctgtcaggttgcagaaagagagcagcctaagatcatggttatcgactcaatccaagtt
atgcatgtcgctgacgttcaatcgtctcctggcagtgttgctcaggtgcgcgaatcggca
accgcattaacgcgctatgcgaaacagaacaacgttgccgtgttcctagtgggacacgta
actaaagacggtaccttagcgggaccaaaagtacttgaacacattattgactgttcggtg
ttgttagatggcggaacggacagtcgttttagaaccttgcgcagccacaagaaccgtttt
ggtgcagtgaatgagctaggtgtgtttgccatgacagggcaaggactaaaagaagttagc
aatccatcggctatttttctgtctcgtggtgaagaagaaacctcaggcagttcagtgatg
gtagtttgggaaggaacgcgtccactccttgttgaaatccaagcgctggtggattattcg
cagctggctaacccgcgtcgtgtcgctgttggtctcgagcaaaatcgactgtcattgtta
ctagccgtgctgcataaacacggcggcttacaaatggctgaccaagatgtgtttgtgaat
gtcgttggtggtgttaaagtaaccgaaaccagtgctgatcttgcattggtaatggcttta
ctttcgagtttcagagaccgcgcattgccaaaagatgtggtggtttttggcgaagtaggc
cttgctggtgagattcgacctgtaccgagcggtcaagagcgcttaaatgaggcgtttaaa
cacggcttcaagagagccattgtaccagcggctaacatgcctaaaggtggcattccagga
atgcagatccacggtgtgaaaaaattatcggaagcaattaatgcttttgatgagttgtaa
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