Vibrio atlanticus: VS_2472
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Entry
VS_2472 CDS
T00812
Name
(GenBank) c-di-GMP phosphodiesterase A-related protein
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VS_2472
Enzymes [BR:
vsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VS_2472
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS_9
PAS
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-ProteinID:
CAV19631
UniProt:
B7VJG7
LinkDB
All DBs
Position
1:2641817..2643856
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AA seq
679 aa
AA seq
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MPPQQLQHWFTQLTANSPFFFAVLDAQHNYFMVNERYCDIAGLSKTELVGMNDRQTLGEQ
FYQHLKPYYERAFNGETIEAEITLNETALDTSLHFSLSPLTNGKKTEYIIFHAFDTSENQ
VLVRSLEESEAKFHKLSHLLPDGLLLVENDYILSSNPAAARLLGFNSTTELIGEELGRLF
IDEQTKTVFNNDLSSIISESGLVCLTGARCGFERKVQLNIDSTVILGSSTQLVLIQDAQE
TTKQYTPANSEDAYIDTLTKLYNRLGFTKSLEQFIHNKTPVVMLYLDIDNFKNINDSLGH
HIGDKVIKEVASRLKRQLPRQAIIGHLGGDEFGIILPEPEHPRTPEILSEKIISLINQPF
DLHHFSKRLACSIGSVSFPHDGSDARILLQNADTAMYEAKDRGRNRLIKFNEQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFTINGAEALVRWKHPVEGYISPAAFIPVAER
AGLIEQLGRVVMREVFATVKRWKMQGILPGRVAINLSPEQFGNPKLIDFMEKLLRSTELD
PSAITFELTESAVMSDSEHTLQMLNAIKRLGFALSIDDFGTGYSSLSYLARFPIDELKID
RAFISDIDTLPKQITVIENIINLGKSLDLTVVAEGVETSEQATLLSNLNCGSIQGFHFYR
PQPKQEVEELFAQNRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccagcaactacaacattggtttacacagcttactgcaaacagcccgttcttt
tttgcggtacttgatgctcaacataactattttatggtgaatgagcgttactgtgatatt
gctggtttaagtaaaacagagcttgtaggcatgaatgaccgccaaaccttgggcgagcaa
ttctaccaacaccttaagccttactatgagcgtgcattcaatggcgaaacaattgaggcg
gaaatcaccctaaacgaaacggctttagacactagccttcatttcagcctatctccgctt
accaatggtaaaaagactgaatacatcatctttcacgccttcgatacatctgaaaaccaa
gtacttgtccgttctttagaagagtctgaagcgaaattccacaagctatctcacctgctc
ccagacggattgctattagttgaaaacgactacattctgtcttcgaaccctgcagctgca
cgcttacttggttttaactccaccacagaattgattggcgaagagttaggccgattattt
atcgatgaacaaaccaaaacagtctttaataatgacctcagctccattatttctgagtct
ggcttggtttgtttaacgggtgctcgatgtggctttgaacgtaaagttcagttaaatatc
gactcgacggtcattcttggaagcagtacccaactcgtacttattcaagacgctcaagaa
acaacaaaacaatacacacccgctaacagtgaagatgcctacatcgatacactgactaag
ctctacaaccgacttgggtttaccaaaagccttgagcagttcattcacaacaagacccct
gttgtgatgctctacttagacatcgataacttcaaaaatatcaatgactcacttggccac
cacatcggtgataaagtgattaaagaggtcgcatctcgcttaaaacgacaactgcctcgt
caagctattattggccatttaggcggtgatgaatttggtattattctgcctgagcctgaa
cacccacgaacacctgaaatactctctgaaaagatcatatctctgatcaaccaacccttc
gatctccaccattttagcaagcgtttagcctgctcgattggtagtgtgagctttcctcac
gatggcagtgacgcacgtatcttgctacagaatgctgacaccgcaatgtatgaagctaag
gatcgtggacgcaaccgcctgatcaagttcaacgaacagatgaacaaagaagcgcgaatg
cgactgtggcttgagatagaactgcaaaaagcactgcaacagaacgggcttgaggtttgg
taccaaccaaaagtaaatgcgcgtgacttcaccattaacggagcagaagctctggtacgt
tggaaacaccccgtagaaggttatattagccctgccgcatttattcctgtagcggaacga
gctggccttattgaacaacttggtcgtgtggtaatgcgcgaagtatttgccacggtgaaa
cgttggaagatgcaaggtattttacctggtcgcgtcgcgatcaacctttcaccagagcag
tttggtaatccaaaattgattgatttcatggagaagttgctgcgttctactgagctagat
ccaagtgcgattacctttgagcttacagaaagtgccgtaatgagtgatagtgagcacacg
cttcaaatgctgaacgcgattaagagacttggctttgcgttatccatcgatgactttggt
acgggttactcttctctatcttaccttgctcgctttccgattgatgagcttaaaattgac
cgagcttttatctcagatatcgataccttaccaaagcaaattaccgtaattgaaaacatc
atcaaccttgggaaatctctcgatttaaccgtggttgcagagggtgtcgaaaccagtgaa
caagcaaccctgctgtctaacctcaactgtggttcaattcaaggtttccacttctatcgc
cctcaaccaaaacaagaggttgaagaactgttcgcccaaaaccgtcgtcacaagaattaa
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