Vibrio atlanticus: VS_2480
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Entry
VS_2480 CDS
T00812
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsp03016
]
VS_2480
Enzymes [BR:
vsp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VS_2480
Transfer RNA biogenesis [BR:
vsp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VS_2480
Prokaryotic type
VS_2480
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
E2_bind
Motif
Other DBs
NCBI-ProteinID:
CAV19639
UniProt:
B7VJH5
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All DBs
Position
1:complement(2652051..2653004)
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AA seq
317 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYVVIAKLGERTNTSDSDGEVVETRDVNVTQEQLERCIASFKGETDQ
IPSMFSALKYQGKPLYEYARAGIEVPRESRKITVYSIELLRFEGDEVEMEVHCSKGTYIR
TITDDLGEMLGCGAHVTMLRRTGVAKYPYDRMVTLEQLNEILEQAQAQEIAPKELLDPLL
MPMDTAVEDLPEVNLNAELTDLVQHGMPVQVSGAPTEGTVRMTSGEEKLFVGVAQIAEDG
RVAPKRLVVFRDEEPQA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgtcgtaaaggtcgccctatcaacggggtaattctgttagataagccaacg
ggcatttcgtctaatgatgcactgcaaaaagtaaaacgtatttactttgcagagaaggca
gggcacaccggtgctcttgatcctcttgcgactggcatgctgccaatttgtcttggtgaa
gcaacgaagttttctcagtttctattggattctgacaagcgctacgtagtaatcgctaag
cttggtgagcgtaccaatacctctgactctgatggtgaagtggtagagacacgagatgtt
aacgtgactcaagagcaacttgaacgctgcattgcaagcttcaaaggggaaaccgaccag
attccatcaatgttctcagcattgaagtatcaaggtaagcctttgtatgaatacgcacgt
gcaggtatcgaggtgcctcgcgaatctcgtaagatcactgtttactctattgaactactt
cgctttgaaggtgatgaagttgagatggaagtgcattgttcaaaaggcacttacatccgc
acaattaccgacgatcttggtgaaatgctaggttgtggtgcccacgtgaccatgcttcgt
cgtactggtgttgctaagtatccgtacgatcgtatggtgactttggagcagttgaacgag
atcctagagcaagcgcaggcgcaagaaattgcacccaaagagctgcttgacccactatta
atgccaatggacacagccgttgaagacttaccagaagttaacttaaacgcggaactgact
gacctagttcagcacggtatgcccgttcaggtttctggtgcgccaactgaaggtacggtt
cgcatgacaagtggtgaagagaaactgtttgttggtgttgctcagattgctgaagatggc
cgagttgcaccgaagcgtttggttgttttcagagatgaagagccacaagcataa
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