Vibrio atlanticus: VS_2483
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Entry
VS_2483 CDS
T00812
Name
(GenBank) Transcription elongation protein nusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vsp03021
]
VS_2483
03009 Ribosome biogenesis [BR:
vsp03009
]
VS_2483
Transcription machinery [BR:
vsp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VS_2483
Ribosome biogenesis [BR:
vsp03009
]
Prokaryotic type
rRNA transcription factors
VS_2483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_KhpA-B
Glyoxalase_4
S1_RRP5
MRP-S35
Motif
Other DBs
NCBI-ProteinID:
CAV19642
UniProt:
B7VJH8
LinkDB
All DBs
Position
1:complement(2656266..2657753)
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AA seq
495 aa
AA seq
DB search
MNKEILAVVEAVSNEKAVPRERIFEALEIALATATKKKSELEIEVRVEIDRKTGNFETFR
RWEAVEEVEFPTKEISIEAAKYDDPEIELGGFIEDDIESVTFDRITTQTAKQVIVQKVRE
AERAQIVEQFIDNEGELVTGAVKKVNRDTVILDLGNNAEAVILRDDQLPRENFRPGDRVR
GLLYAVKPEARGFQLFVTRSKPEMLAELFRVEVPEIGEELIELKGAARDAGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSNDLGGERIDIVLWDDNPAQFVINAMAPADVASIIVDE
DTHSMDIAVEADNLAQAIGRSGQNVRLASQLTGWELNVMTVADLEKKHQEEAVASIENFM
KHLDIEEDFAQMLVEEGFSTLEEVAYVPVNELLEVDGLDEGIVEELRNRAKDALTTLALA
KEETFDGVEPAEDLLALEGLEREMAYKLAAKGVATLEDLADQGVDELEGIEDLTAERAGE
LIMAARNICWFGDEE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaattttggcggtagtagaagctgtttctaatgagaaagcagttcctcgt
gagcgtatttttgaagcgcttgaaatcgcgcttgcaacggcaacaaaaaagaaaagcgaa
ctagaaatcgaagttcgtgttgagattgaccgtaaaacgggtaatttcgaaactttccgc
cgttgggaagctgttgaggaagttgaattcccaacaaaagaaatctctattgaagctgca
aagtacgatgatccagagatcgaacttggcggtttcattgaagatgatatcgaatcagta
acgtttgaccgtattacgactcaaacagctaagcaagttatcgtacagaaagtacgtgaa
gctgaacgcgctcaaatcgttgaacagtttattgataacgaaggcgagctagtcactggc
gcagttaagaaagttaaccgtgacacagtgattctagatctaggtaacaacgctgaagcg
gtaatccttcgtgatgaccaacttcctcgtgaaaacttccgtccaggtgaccgtgttcgt
ggtcttctatacgcagttaagccagaagctcgcggcttccagctgtttgttactcgttct
aagccagaaatgctagctgaactattccgtgttgaagtgcctgagattggtgaagagcta
attgaacttaaaggtgctgcacgtgacgctggttctcgtgctaaaatcgccgttaaaaca
aacgacaaacgtattgaccctgttggtgcgtgtgttggtatgcgtggcgcacgtgtacaa
gctgtatctaacgaccttggcggtgagcgtatcgatatcgtgctttgggatgataacccg
gcgcaattcgttatcaatgcaatggctcctgctgatgttgcttctatcatcgttgatgaa
gatacgcactcaatggacatcgcggttgaagctgacaacctagcgcaagctatcggtcgt
agcggtcaaaacgtacgtctagcgtctcaacttactggttgggaactgaacgtaatgact
gttgctgatctagagaagaagcaccaagaagaagcagttgcttctattgaaaacttcatg
aagcacctagatatcgaagaagactttgctcaaatgcttgttgaagaaggcttctctacg
cttgaagaagtagcctacgttcctgtgaacgagcttcttgaagtagatggtctagatgaa
ggtatcgttgaagaattgcgtaaccgcgcgaaagacgcactgacaactctagcgctagcg
aaagaagaaactttcgatggtgttgagccagctgaagacctacttgcacttgaaggtctt
gagcgtgaaatggcttacaagctagcagcaaaaggcgttgcgacattggaagacctagct
gaccaaggcgttgatgaactagaaggcatcgaagacctaactgcagagcgtgcaggcgag
ctaattatggctgcgcgtaacatctgttggttcggcgacgaagaataa
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