Vibrio atlanticus: VS_2524
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Entry
VS_2524 CDS
T00812
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00550
Peptidoglycan biosynthesis
vsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VS_2524
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vsp01003
]
VS_2524
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsp01011
]
VS_2524
Enzymes [BR:
vsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
VS_2524
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VS_2524
Glycosyltransferases [BR:
vsp01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
VS_2524
Peptidoglycan biosynthesis and degradation proteins [BR:
vsp01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
VS_2524
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CAV19681
LinkDB
All DBs
Position
1:complement(2712500..2714899)
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AA seq
799 aa
AA seq
DB search
MMTKMLTPKKAPPKKAPAKKSPATKGKPRKPRSAAKKTKPKAKPSGKRGWLKILWGISWK
AGLALAALLLFVGIYLDSVVKQRFEGQLFDLPTVVYARVLDLSPGTAVSLVQVKNELDVL
NYRKVNSPRHPGEYSSSSTKIEMIRRPFEFVDGPEADRHVMLHFNGNELTRIQSLEKKGD
MGYLRVEPKMLGMLEKSNDEQRLFLKRNQFPEVMVDALLATEDRSFYQHDGVSPLAIARA
MVVNVKAGRTVQGGSTLTQQLAKNLFLSSERTLWRKVREAYIALILDHRYSKDRILEAYL
NEVYLGQNGGQAIHGFGLASRLYFGQPIQELRIDQLALLVGMVKGPSYYNPVRYPERAKT
RRDLVLRLLMQQDILTPRQYEEAASRDLDIQDNPRIASRQPAYFQQVNIELKKYVGDRFE
AKKGIRVFTSLDPVSQDKLEKSIARKVPDLSKTAGNKLEAAAIAVDRNTGEIRAMVGGKR
TGYDGFNRALNASRPIGSLVKPAIYLTALEQPQKYTLATTLKDTPLSLKGSKGSVWSPRN
FDRKFRGDVPLYVALSKSYNVPTVRLGMQLGIDSVSDTIGKLGVDKNEIRPVPSMFLGSF
SLTPFQVAQMYQTITNSGRIAPLSALRSVVDNDGEVLYQSIPRVSQSVDQQAAWLTTYAM
KRGVSEGTGRFLQGQFAWAGLAGKTGTSNDSRDSWFVGVDGREVTTIWLGRDDNKPTKLT
GSSGALRVYADYLKQRTPEQLLLPWPTGIATASFTRTSEGALEFDCGGTVKLPVWDESGS
IKKGCESQPKQWLKKLFQW
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaaaatgttaacgccaaaaaaggcaccacctaaaaaagcgccagcaaagaag
tcaccagcgaccaaaggcaagcctagaaagccaagatcagcagcgaaaaagactaaacct
aaggctaagccgtctggcaagagaggttggttgaagattctgtggggcatttcttggaaa
gctggcttagcacttgccgcattgctgttgttcgtcggtatttatctggattcagtggtt
aagcagcgttttgaaggtcagctttttgatctgccaaccgttgtttatgctcgtgtgttg
gatctgtctccggggactgcggtgagtttggtacaggttaagaatgaactggatgtactt
aattaccgtaaagtgaattctcctcgtcacccaggtgagtactcttcttcttcaaccaag
attgaaatgattcgtcgtccgttcgagtttgtcgatggaccggaagcggatcgtcatgta
atgctgcatttcaacggtaacgagttaactcgtatacagtcgctagagaagaaaggcgac
atgggctatctacgtgttgagccgaaaatgttgggtatgcttgaaaaaagtaacgatgag
caacgcctgttcttaaaacgtaatcagttcccagaagtgatggttgatgccttattagca
actgaagaccgaagcttctatcaacacgatggggtatcgccattagcaatcgctcgtgca
atggtcgttaacgtcaaagctgggcgaacggtacaggggggtagtacgctgacacaacag
ctggcaaaaaacctgttcttgtccagtgaacgtacattgtggcgtaaggttcgtgaagcc
tacattgcgcttatcttggaccatcgttacagcaaagaccgtattctagaggcttactta
aacgaggtttaccttgggcaaaatggtgggcaagcgattcatggtttcggcttggcatct
cgtttgtatttcggtcaacctattcaagagctccgcatcgatcaactagcattgctggtg
ggtatggtgaaaggcccttcgtattacaatccggttcgttaccctgagcgtgctaagact
cgacgcgatctggttcttcgcttattgatgcagcaagacatattaactccgcgacaatac
gaagaagcggcgagtcgtgatttggatattcaagacaatccacgtattgctagtcgtcag
ccagcttacttccagcaagtaaacattgagcttaagaagtatgtcggcgatcgatttgaa
gcgaaaaaagggattcgagtctttacctctctggatcccgtttcccaagacaagttagaa
aagtcgattgctcgtaaagtgcctgatttatcgaaaacggcaggtaacaaactggaagcc
gcagctattgccgtggatcgcaatactggtgaaatccgagcgatggttggtggtaaacgt
accggttacgatggttttaaccgtgctttgaatgcgagtcgccctattggttctttggtt
aagcctgccatctacttaaccgcattggaacaacctcagaagtatacgttggcgacaaca
ttgaaggacaccccactgagcttgaaaggcagtaagggcagcgtatggagcccaagaaac
ttcgatcgtaagttccgtggcgatgtgcccttgtatgtggcgctttctaagtcttataac
gtacctaccgttcgtttaggcatgcagttaggcattgatagcgtttcggacaccattggt
aagctgggtgtcgataaaaatgagattcgcccagtaccgtcgatgtttttgggttcgttc
tcactgactccgttccaagttgctcagatgtaccaaaccattaccaactctggtcgcatt
gcgcctttgtctgcacttcgttctgttgttgataatgatggcgaagttctgtatcaatcg
attcctcgtgtatcgcaaagcgttgaccagcaggcagcttggttaacaacctatgcgatg
aagcggggtgtatcggaaggtacaggtcgtttcttacaaggtcagtttgcatgggctggg
ttagctggtaaaacgggcacaagtaatgacagtcgagacagttggttcgtgggtgttgat
ggtcgtgaagtcacgacgatttggttaggccgagatgataataaaccgactaaactaacc
ggttctagcggtgcgttgcgtgtctatgccgattatctgaagcaaagaacgcctgaacaa
ctattactgccttggccaacaggaattgcgaccgctagctttactcgaacttctgaaggg
gcgttagagtttgactgtggtggtacagtcaaattgccggtctgggatgaaagtggcagc
attaaaaagggctgtgaaagtcaaccaaaacagtggctaaagaagctttttcagtggtaa
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