KEGG   Vibrio atlanticus: VS_2559
Entry
VS_2559           CDS       T00812                                 
Name
(GenBank) Signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vsp  Vibrio atlanticus
Pathway
vsp02024  Quorum sensing
vsp03060  Protein export
vsp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VS_2559
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VS_2559
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VS_2559
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vsp02044]
    VS_2559
Enzymes [BR:vsp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     VS_2559
Secretion system [BR:vsp02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VS_2559
  Eukaryotic Sec-SRP protein
   VS_2559
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin cobW KTI12 AAA_31 AAA_30 T2SSE Mg_chelatase AAA_33 AAA_24 APS_kinase AAA_19 AAA_18 VirC1 AAA_14 Rad17 AAA_16 Helicase_RecD ATP_bind_1 Thymidylate_kin
Other DBs
NCBI-ProteinID: CAV19739
UniProt: B7VK30
LinkDB
Position
1:complement(2748036..2749448)
AA seq 470 aa
MSEEKTMFDNLTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVRDFVKR
VKEGAVGVEVSKSLTPGQEFIKIVQAELEAVMGESNEALDLAAQPPAVILMAGLQGAGKT
TSVGKLSKLLTERDKKKVLVVSADVYRPAAIKQLETLASDVGVDFFPSSADQKPLDIANA
AIDHAKKKFYDVLIVDTAGRLAIDEEMMGEIKELHTAIKPVETLFVVDAMTGQDAANTAK
AFGDTLPLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRI
LGMGDVLSLIEDLQKNVDTEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMMDKL
PGMSQLPDNVKDKVDDKMFKQMEAIINSMTMKERQRPDLIKGSRKKRIAAGSGTQVQDVN
RMLKQFTQMQKMMKKMQKGGMKGMMRNMQGMMGGGGGMGGMGGGFNPFGR
NT seq 1413 nt   +upstreamnt  +downstreamnt
ttgagcgaagagaaaactatgtttgataatttaacggatcgtctatccaaaacgctgaaa
aacatcagcggtaaaggtcgcctgaccgaagacaatattaaagagacgctgcgtgaagta
cgtatggcgctacttgaagccgacgttgcactgccagttgtccgcgattttgttaagcgc
gttaaagaaggcgctgtaggtgttgaggtttctaaatctctcacaccgggtcaagaattc
attaagatcgttcaagctgaacttgaagctgtgatgggggagtctaacgaggctcttgac
ctagcagcacaaccgccagcagttatcttaatggcgggtctacaaggtgcgggtaaaacc
acatcggtaggtaagctatctaagctcctgactgagcgtgataagaagaaagttttggtt
gtgtctgccgacgtttaccgtccagccgcgatcaaacagcttgaaaccttagcaagcgat
gtgggtgtcgacttcttcccatcttcagctgaccaaaagcctcttgatattgcaaacgct
gcaatcgaccacgcgaagaagaaattctacgacgtgctaattgtcgatactgccggtcgt
ttggctatcgatgaagagatgatgggtgaaatcaaagagcttcatactgccattaaacca
gtagagacgctgttcgttgttgatgctatgacaggtcaagatgctgcgaatactgcaaaa
gcctttggcgatacgctaccactaaccggtgttatcttaacgaaagtggatggtgacgcg
cgtggtggtgctgcactgtctgttcgtcacatcacaggtaagccgattaaattcttaggt
gttggtgagaaaactgacgcactagaaccattccacccagatcgtgttgcttctcgcatc
ctaggtatgggcgacgtactgtctcttattgaagatctacagaagaacgttgataccgag
aaagcagagaaactggctaagaagttcaaagagaagaaaggttttgaccttgaagacttc
cgcgagcagcttggtcagatgaaaaatatgggcggcatgatgggcatgatggataagctt
ccaggcatgtctcagctaccagacaacgttaaagataaagttgatgacaagatgttcaag
caaatggaagcgatcatcaactctatgacaatgaaagagcgtcagcgcccagacctaatc
aaaggctcacgcaaaaagcgtattgctgcaggttctggtacgcaagtacaagatgtaaac
cgtatgcttaaacagttcactcaaatgcagaagatgatgaagaaaatgcagaaaggtgga
atgaaaggcatgatgcgcaacatgcaaggcatgatgggcggcggtggaggtatgggcgga
atgggtggtggttttaacccgtttggccgataa

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