KEGG   Vibrio atlanticus: VS_2891
Entry
VS_2891           CDS       T00812                                 
Name
(GenBank) Transcriptional regulator
  KO
K10917  PadR family transcriptional regulator, regulatory protein AphA
Organism
vsp  Vibrio atlanticus
Pathway
vsp02024  Quorum sensing
vsp05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VS_2891
   05111 Biofilm formation - Vibrio cholerae
    VS_2891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vsp03000]
    VS_2891
Transcription factors [BR:vsp03000]
 Prokaryotic type
  Helix-turn-helix
   PadR family
    VS_2891
SSDB
Motif
Pfam: PadR Vir_act_alpha_C HTH_34
Other DBs
NCBI-ProteinID: CAV20188
LinkDB
Position
1:3043013..3043552
AA seq 179 aa
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAQNDQVTCVLEPQ
EGKPDRKVYSITDAGRGALGEWFEQPTAHPTVRDEFSAKLIACAVQPSDAYRVQLAELVE
ESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLIREAWIVWADEVLLELGALA
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtcattaccacacgtaattttaaccgttttaagtacacgcgatgctactggttacgat
atcacaaaagaattctccgcaagcattggttacttctggaaagctagccaccaacaagtt
taccgcgagctaaataaaatggctcagaacgaccaggtaacttgcgtacttgagcctcaa
gaaggcaaacctgatcgtaaagtttactctatcaccgatgctggccgtggcgcgctaggt
gaatggtttgaacaaccaactgcacacccaaccgttcgtgacgagttctcagctaagtta
atcgcttgtgctgtacaaccttctgatgcgtaccgtgtacaacttgctgaactagtagaa
gagtctcgcaaactggtttctcactacaaagaaatcgaagcggcttactacgcaacgcca
tctacactagacaagcaagcacgcctagagcgtctaacgcttcgtcgtaacctactgatc
cgtgaagcatggattgtatgggctgacgaagtactgcttgaacttggcgctcttgcttaa

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