Vibrio atlanticus: VS_2891
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Entry
VS_2891 CDS
T00812
Name
(GenBank) Transcriptional regulator
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vsp
Vibrio atlanticus
Pathway
vsp02024
Quorum sensing
vsp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VS_2891
05111 Biofilm formation - Vibrio cholerae
VS_2891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsp03000
]
VS_2891
Transcription factors [BR:
vsp03000
]
Prokaryotic type
Helix-turn-helix
PadR family
VS_2891
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PadR
Vir_act_alpha_C
HTH_34
Motif
Other DBs
NCBI-ProteinID:
CAV20188
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All DBs
Position
1:3043013..3043552
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AA seq
179 aa
AA seq
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MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAQNDQVTCVLEPQ
EGKPDRKVYSITDAGRGALGEWFEQPTAHPTVRDEFSAKLIACAVQPSDAYRVQLAELVE
ESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLIREAWIVWADEVLLELGALA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgtaattttaaccgttttaagtacacgcgatgctactggttacgat
atcacaaaagaattctccgcaagcattggttacttctggaaagctagccaccaacaagtt
taccgcgagctaaataaaatggctcagaacgaccaggtaacttgcgtacttgagcctcaa
gaaggcaaacctgatcgtaaagtttactctatcaccgatgctggccgtggcgcgctaggt
gaatggtttgaacaaccaactgcacacccaaccgttcgtgacgagttctcagctaagtta
atcgcttgtgctgtacaaccttctgatgcgtaccgtgtacaacttgctgaactagtagaa
gagtctcgcaaactggtttctcactacaaagaaatcgaagcggcttactacgcaacgcca
tctacactagacaagcaagcacgcctagagcgtctaacgcttcgtcgtaacctactgatc
cgtgaagcatggattgtatgggctgacgaagtactgcttgaacttggcgctcttgcttaa
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