Vibrio atlanticus: VS_2941
Help
Entry
VS_2941 CDS
T00812
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp03030
DNA replication
vsp03430
Mismatch repair
vsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VS_2941
03430 Mismatch repair
VS_2941
03440 Homologous recombination
VS_2941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsp03032
]
VS_2941
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_2941
Enzymes [BR:
vsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VS_2941
DNA replication proteins [BR:
vsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VS_2941
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VS_2941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAV20237
UniProt:
B7VM47
LinkDB
All DBs
Position
1:3099571..3100203
Genome browser
AA seq
210 aa
AA seq
DB search
MNRLVRYYWHHKLKGSTYQPLFTAPANHEYVSLDCETTSLDPNQAELVTIAATKIIGNRI
ITSQPFEVRLRAPQSLDCNSIKIHRIRHQDLKHGIEEKQALIELLNFIGNRPLVGYHIRY
DKKILDRACLKQLGFPLPNRLVEVSQLYQDKLERQLPNAYFDLSMDAICRQLDLPIPVNK
HDALQDAISAALIFVRLKHGDLPRFNSSYS
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaatagattggttcgttattactggcatcataaactcaaaggctctacttatcagcct
ctgtttactgcgcctgctaatcacgaatacgtatctctcgattgtgaaaccaccagcctc
gaccccaatcaggcagaattagtcaccattgccgcaaccaagatcatcggcaaccgaatc
attaccagccaaccttttgaagtccgattgcgcgcccctcaatcgctcgattgcaattca
ataaaaatccaccgtattcgccatcaagatctaaagcacggcatcgaagaaaaacaggct
ttaatcgagctactgaacttcattggaaatcgtcctttagtcggctatcacatccgctat
gataaaaaaatcctcgatcgcgcctgtttaaaacagcttggatttccactgcctaaccga
ttagtcgaagtaagccaactttatcaagacaagctcgaaaggcagctgcccaatgcctat
tttgatctcagtatggacgccatctgtcgccagctcgatttacctatccccgtcaataaa
catgatgcattacaagacgctatctccgcagccctgatctttgttcgcctgaaacatggt
gatctgccccgtttcaactcttcttattcttaa
DBGET
integrated database retrieval system
