Vibrio atlanticus: VS_2948
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Entry
VS_2948 CDS
T00812
Name
(GenBank) putative factor-for-inversion stimulation protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
vsp
Vibrio atlanticus
Pathway
vsp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VS_2948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsp03000
]
VS_2948
03036 Chromosome and associated proteins [BR:
vsp03036
]
VS_2948
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_2948
Transcription factors [BR:
vsp03000
]
Prokaryotic type
Helix-turn-helix
Other families
VS_2948
Chromosome and associated proteins [BR:
vsp03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
VS_2948
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VS_2948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
HTH_30
Xre-like-HTH
Baseplate_J_C
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CAV20244
UniProt:
B7VM54
LinkDB
All DBs
Position
1:3107239..3107535
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AA seq
98 aa
AA seq
DB search
MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVSELYELVLAEVEQ
PLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaaaatctgacttcagaagcattgacagtaactacagttacatcacaagac
caaatcacgcagaagccactacgtgactcagttaaagcatcattgaaaaattaccttgct
caattaaacggtcaagaagtcagcgagttatacgaattagtattagctgaagttgaacag
ccactactagacactatcatgcagtacactcgcggtaaccaaactcgcgcagcaaccatg
atgggtattaaccgcggtactcttcgcaagaaacttaaaaaatacggcatgaactaa
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