Vibrio atlanticus: VS_3000
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Entry
VS_3000 CDS
T00812
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsp03016
]
VS_3000
Enzymes [BR:
vsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
VS_3000
Transfer RNA biogenesis [BR:
vsp03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
VS_3000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_4
Methyltransf_11
Methyltransf_31
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_15
PrmA
Methyltransf_12
DREV
DUF6579
Motif
Other DBs
NCBI-ProteinID:
CAV20278
UniProt:
B7VM88
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All DBs
Position
1:3150741..3151850
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AA seq
369 aa
AA seq
DB search
MANLEVNPQRYQEQLAEKTERLTEMFSEYNVPELEVYESPEQHYRMRAEFRVWHEGDDMY
YVMFNQETKEKYRVDQFPAASRLINDLMPLLTDAMKDNHSLRHKLFQVDFLSTLSGEILV
SLLYHRQLGEQWIQDAKALKQQLNDEGFNLNLIGRARKMKIVLDRDYVIEKLDVNGDSYI
YQQVENSFTQPNGKVAEKMLEWAVDCTQDSKGDLLELYCGNGNFSLALAQNFERVLATEL
AKPSVESAQYNIAANKIENVQIIRMSAEDFTVAMEGKREFRRLQQANIDLKSYNCNTIFV
DPPRSGMDVDTCKMVQGYERIMYISCNPETLKENLDILSETHDITRFALFDQFPYTHHME
AGVFLERKA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttagaagtaaacccgcaacgctaccaagaacaactggcagaaaagactgag
cgtcttactgaaatgttctcagaatataatgtgcctgagctggaagtgtatgaatctcca
gaacaacactaccgcatgcgtgcagagttccgcgtgtggcatgaaggtgacgatatgtat
tacgtcatgttcaatcaagagaccaaagaaaaataccgcgtagaccagttcccagcggct
agccgcctgatcaacgacctaatgcctctattaacggatgcaatgaaggacaaccactct
ctacgccacaaactattccaagtagacttcctttctacattaagcggcgagattttggtg
tcactgctttaccaccgccaattgggtgaacagtggattcaagatgctaaagcacttaaa
cagcaattaaacgatgaaggttttaacctaaacctgatcggccgtgcgcgtaagatgaaa
atcgtactggaccgcgactacgttatcgaaaagctagatgtgaatggtgatagctacatc
taccagcaagttgagaacagctttactcaaccaaacggtaaagtagcagagaaaatgctg
gagtgggctgtcgactgtactcaagacagcaaaggcgacttgcttgaactttactgtggt
aacggtaacttctcactagcactggcacagaacttcgaacgtgtactggcaacagaacta
gcgaagccgtcagtagaatctgcgcaatacaacatcgcagccaacaagattgaaaatgtt
cagatcatccgcatgtctgcggaagattttaccgtagcaatggaaggcaagcgtgaattc
cgtcgtctacagcaagcgaacatcgatcttaagagctacaactgcaacactatctttgtt
gatccaccgcgttcaggtatggatgtcgatacttgtaagatggttcaaggctacgagcgt
atcatgtacatctcttgtaaccctgagacattgaaagagaacctagacattctaagcgaa
acacacgacatcacccgttttgctctatttgaccagttcccttacacacaccatatggaa
gcaggtgtattcctagagcgtaaagcgtaa
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