KEGG   Vibrio atlanticus: VS_3018
Entry
VS_3018           CDS       T00812                                 
Name
(GenBank) RNA polymerase sigma-32 factor
  KO
K03089  RNA polymerase sigma-32 factor
Organism
vsp  Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vsp03021]
    VS_3018
Transcription machinery [BR:vsp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VS_3018
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 UCR_14kD HTH_25
Other DBs
NCBI-ProteinID: CAV20295
UniProt: B7VMA5
LinkDB
Position
1:complement(3166085..3166996)
AA seq 303 aa
MSGFNRCITPDQRLMRNRMANQAYQMALVTQDSLDSYIRSANSYPMLTPDEERGLAERLH
YKGEIDAAKGLILSHLRFVVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLV
SFAVHWIKAEIHEYVLRNWRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELG
VEPSEVREMESRLAAQDATFEAPMDDDDGGSAYTAPVYYLEDKASDVAETVEAANWESHT
NNRLGLALKSLDERSQHIVRSRWLDDNKATLQDLADTYSISAERVRQLEKNAMKKLKQAV
GDF
NT seq 912 nt   +upstreamnt  +downstreamnt
ttgtcgggttttaatagatgtattactccagatcagagattgatgaggaaccgaatggca
aaccaagcgtatcaaatggctttagtcacacaagatagtttagatagctatatccgctca
gcgaacagttacccaatgctgacgcctgacgaggaacgtggacttgcagagcgattacat
tacaaaggtgagatcgacgctgcgaaaggcttgatcctttcacacctacgattcgtggtg
cacgttgcaagaggctactctggctacgggctgccaatggctgaccttgtccaagaaggt
aacatcggcttgatgaaggctgttaagcgctttaatccagaagttggtgtccgtctagtc
tcttttgctgttcactggatcaaagctgagattcatgaatacgtattgcgtaactggcgt
atcgttaagatcgcaacgactaaagcacagcgtaaattattctttaaccttcgtaagtct
aaaaagcgtttaggttggttcaataacggtgaagttgagacggttgcgcgtgaactgggt
gttgagccttcagaagttcgtgaaatggaatctcgcttagcggcacaagacgcgacgttt
gaagcgcctatggacgacgacgacggtggttctgcttacacagctccagtttattaccta
gaagataaagcgtcagacgttgctgagacggttgaggcagctaactgggaatctcatact
aataatcgcctaggtctcgcattgaagagcttagacgagcgtagtcaacacattgttcgc
tcacgttggttagacgacaacaaagcaacactgcaagacttagcggatacctatagcatt
tctgcagagcgtgtccgccagttagaaaagaatgcgatgaagaaattgaagcaagccgtt
ggcgacttctaa

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