Vibrio atlanticus: VS_II0054
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Entry
VS_II0054 CDS
T00812
Name
(GenBank) TRAP-type C4-dicarboxylate transport system, large permease component
KO
K11690
TRAP-type transport system large permease protein
Organism
vsp
Vibrio atlanticus
Pathway
vsp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VS_II0054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsp02000
]
VS_II0054
Transporters [BR:
vsp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VS_II0054
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
CAV25271
UniProt:
B7VQ25
LinkDB
All DBs
Position
2:65080..66423
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AA seq
447 aa
AA seq
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MSDVAQFFSDIIAGELDIYVITFTLVSVMVILLFLSFPMIVPLAVGALIGLIHFSQVEPG
VLIQQMVTGISPNALIAVPMFILAADIMTRGHTAYNLLGLIQAFVGHLRGGLPITTCISC
TLFGSVSGSTQATVVSVGQIMRPKLLQAGYKDSFVMALIINASDIAFLIPPSIGLILYGT
LANASVGELFIAGIGPGLVLASLFSLYSYAYSVKHSDTITLVEKANTAERIEAIKKAILP
LGFPALIIGGIYSGIVTPTEAASFAVLYAIIVECIFYRKLGVKDICDAALNTGLITAVVF
VLVGVGQAFSWYISYEQIPQELLAPLNLEDASPEFILFVIALTFFVGCMFVDSLVVLLIL
TPIFMPIVDAAGIDPILVGVMVTLQMAIGSATPPFGCDIFTAIAIFERPYMEVIRGTLPF
FLILILMSALLIFFPSIALLPRDILFN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgttgcacagtttttctcggacattattgccggcgaattagatatttatgtc
atcacatttactcttgtttctgtgatggtgattttgctgtttttgagcttcccgatgatt
gtaccgttagcggttggagctttaattggcttgattcatttctctcaggtagagccggga
gtactgattcagcagatggtcacgggcatttcgccgaacgcattgattgcggtacccatg
tttatcttagcagccgatatcatgacgcgcggccacacagcctataacttacttggcctg
attcaagcatttgtcggacatctgcgtggtggcttgccgattacgacgtgtatcagctgt
actttatttggttctgtttccggttcgacccaagcgaccgtggtgtcggttggccaaatc
atgcgtccgaagttgctgcaagcaggctacaaagacagctttgtgatggcgctgatcatc
aatgccagtgacatcgcgtttcttatccctccgagcatcggcttgattctttacggcacc
ttagccaacgccagtgtgggtgaattattcattgccggtattggcccgggtttagtactc
gcgagcctgttctcattatacagctatgcctacagcgtaaaacacagcgacaccatcact
ttggttgaaaaagccaacaccgcagaacgcattgaagcgatcaagaaagcgattcttcct
cttggtttccctgctttgattatcggtggtatctattcgggtattgtgacgccaaccgaa
gcggcctcattcgctgtgttgtatgcgatcatcgttgagtgcattttctatcgcaaactt
ggcgtaaaagacatctgcgatgcggcgttaaataccggcttgattaccgcggttgtcttt
gtgctggtgggtgttggtcaggcgttctcttggtacatctcgtatgaacaaatccctcaa
gagttgttggctcctctcaatctagaagacgcttcgcctgagttcatcctgtttgttatc
gcactgactttctttgtcggttgcatgttcgtagattcattggtggtgctgcttatcttg
acgcccatcttcatgccgattgttgatgcagcaggcatcgacccaatcttggtcggagtg
atggtcacgctacaaatggcgattgggtcggcaacgcctccattcggttgtgacatcttt
accgcaattgcgattttcgagcgtccttatatggaagtcatccgcggaacattgccgttt
ttccttatcttgatattgatgtctgcgttgctgattttcttcccaagtatcgctctgtta
ccaagagacattttattcaattaa
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