KEGG   Vibrio atlanticus: VS_II0198
Entry
VS_II0198         CDS       T00812                                 
Name
(GenBank) Conserved hypothetical protein
  KO
K19236  L,D-transpeptidase YcfS
Organism
vsp  Vibrio atlanticus
Pathway
vsp01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    VS_II0198
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vsp01002]
    VS_II0198
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vsp01011]
    VS_II0198
Peptidases and inhibitors [BR:vsp01002]
 Cysteine peptidases
  Family C82
   VS_II0198
Peptidoglycan biosynthesis and degradation proteins [BR:vsp01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   VS_II0198
SSDB
Motif
Pfam: YkuD Ldt_C LysM
Other DBs
NCBI-ProteinID: CAV25529
UniProt: B7VQG7
LinkDB
Position
2:226854..227756
AA seq 300 aa
MRVTLFVAAMASSCVSAATFVLPPAESRIVGRIQQHEVAAGETLAIIAKQYDIGFLSLMA
ANKGVDPFLPAEGYVLSIPSRLILPDTPRKGIVINLAELRLYFFEPEKNQVHVFPVGIGR
VGRDTPEMITKISQKRPNPTWTPPNSIRKEYLEKGIELPKVVPAGPENPLGEYALRLAYG
AGDYLIHGTNKDFGIGLRVSSGCIRMEPKDIEWLFEQVSRGEQVTIIDEPIKVSLEPDRS
VFVEAHEPLTRSDGSKKLLQIPVELKWWLEDADLPNSKAKAVIFAQNGVPVEIAPPVIEF
NT seq 903 nt   +upstreamnt  +downstreamnt
gtgagggtcaccttgtttgtggcagcgatggcttcgtcgtgtgtgtctgcggcgaccttt
gtactgcctccggctgaaagccgtatcgtcggcagaatacaacaacacgaagtggctgct
ggcgaaacgttggctatcattgctaagcaatacgatattggttttctctctttgatggcg
gcaaacaaaggcgttgatccttttcttcctgctgaaggttatgtgttaagtatccctagc
cgtttgattctgccggatacgccgagaaaaggcattgtgattaaccttgccgagttaagg
ttgtacttctttgaacctgagaaaaatcaggtgcacgtatttcctgttggcatcggtcga
gtggggcgagataccccagagatgatcactaagataagccaaaaaagacccaacccgact
tggacgcctccaaactcaattcgtaaagagtatttagagaaagggattgagctaccaaaa
gtggttcctgctgggccggaaaaccctctgggcgagtatgcattacgacttgcttatggt
gcaggtgattatctgatacacggcaccaataaagactttgggataggcttgcgagtcagc
tccggctgtatccgtatggaacctaaagatattgagtggctttttgaacaggttagtcgt
ggtgagcaagtcacaataatcgatgagcctatcaaagtgtctttagagccagatagaagc
gtgtttgttgaagctcacgaaccattgacgcgaagcgacggctctaagaaattattgcaa
atccccgttgaattaaaatggtggcttgaagatgcagatctaccaaattcaaaagcgaaa
gcggtgatatttgctcaaaatggcgtgcctgttgagatagcaccacctgtgattgagttc
taa

DBGET integrated database retrieval system