Vibrio atlanticus: VS_II0198
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Entry
VS_II0198 CDS
T00812
Name
(GenBank) Conserved hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vsp
Vibrio atlanticus
Pathway
vsp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VS_II0198
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vsp01002
]
VS_II0198
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsp01011
]
VS_II0198
Peptidases and inhibitors [BR:
vsp01002
]
Cysteine peptidases
Family C82
VS_II0198
Peptidoglycan biosynthesis and degradation proteins [BR:
vsp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VS_II0198
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
CAV25529
UniProt:
B7VQG7
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All DBs
Position
2:226854..227756
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AA seq
300 aa
AA seq
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MRVTLFVAAMASSCVSAATFVLPPAESRIVGRIQQHEVAAGETLAIIAKQYDIGFLSLMA
ANKGVDPFLPAEGYVLSIPSRLILPDTPRKGIVINLAELRLYFFEPEKNQVHVFPVGIGR
VGRDTPEMITKISQKRPNPTWTPPNSIRKEYLEKGIELPKVVPAGPENPLGEYALRLAYG
AGDYLIHGTNKDFGIGLRVSSGCIRMEPKDIEWLFEQVSRGEQVTIIDEPIKVSLEPDRS
VFVEAHEPLTRSDGSKKLLQIPVELKWWLEDADLPNSKAKAVIFAQNGVPVEIAPPVIEF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgagggtcaccttgtttgtggcagcgatggcttcgtcgtgtgtgtctgcggcgaccttt
gtactgcctccggctgaaagccgtatcgtcggcagaatacaacaacacgaagtggctgct
ggcgaaacgttggctatcattgctaagcaatacgatattggttttctctctttgatggcg
gcaaacaaaggcgttgatccttttcttcctgctgaaggttatgtgttaagtatccctagc
cgtttgattctgccggatacgccgagaaaaggcattgtgattaaccttgccgagttaagg
ttgtacttctttgaacctgagaaaaatcaggtgcacgtatttcctgttggcatcggtcga
gtggggcgagataccccagagatgatcactaagataagccaaaaaagacccaacccgact
tggacgcctccaaactcaattcgtaaagagtatttagagaaagggattgagctaccaaaa
gtggttcctgctgggccggaaaaccctctgggcgagtatgcattacgacttgcttatggt
gcaggtgattatctgatacacggcaccaataaagactttgggataggcttgcgagtcagc
tccggctgtatccgtatggaacctaaagatattgagtggctttttgaacaggttagtcgt
ggtgagcaagtcacaataatcgatgagcctatcaaagtgtctttagagccagatagaagc
gtgtttgttgaagctcacgaaccattgacgcgaagcgacggctctaagaaattattgcaa
atccccgttgaattaaaatggtggcttgaagatgcagatctaccaaattcaaaagcgaaa
gcggtgatatttgctcaaaatggcgtgcctgttgagatagcaccacctgtgattgagttc
taa
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