Vibrio atlanticus: VS_II0395
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Entry
VS_II0395 CDS
T00812
Name
(GenBank) outer membrane protein OmpA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsp02000
]
VS_II0395
Transporters [BR:
vsp02000
]
Other transporters
Pores ion channels [TC:
1
]
VS_II0395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
SIS_2
Phage_OMP
Motif
Other DBs
NCBI-ProteinID:
CAV25864
UniProt:
B7VR10
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Position
2:complement(435461..436522)
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AA seq
353 aa
AA seq
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MKKLSKIMCAVVAASGLAAAPSIAATTYVGAKVGMGWLDSACVSGEKCDDDAIGAGIYSG
YNFTDRLGVELSSDFLGDYKTSFSKNGVTSNFSDPLIAISLTPMYRLPVQQEFDVFFKAG
PAYISHGGETDVVLSAGIGLEKQLSSDWAVRVEYQYFDDFDDNYVQDLNSNFVTVGLSYN
FGTGNTTASAAAASAAVVTQAPAEPIAEPEVVVVEEEVVVTKAKTESFSQGMFETNSTEL
SSEGKTALIPLVEVLQAHPQSSVNVVGHTDSTGAAEYNMMISKKRAAAVAAYIEEQGIAA
DRIAASGEGEENPVASNATAEGRAQNRRVDATIPSFEYQEKAQMEEVIVETAE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactttctaaaatcatgtgtgctgtcgtcgcagcttccggcttagcggcagca
ccttctattgctgcaaccacttatgttggtgcaaaagtgggcatgggttggctggatagc
gcatgcgtaagcggtgaaaagtgtgatgatgatgcaattggtgcagggatatactctggc
tataacttcacagacagactaggtgttgagttaagttctgatttcttaggtgactacaaa
acgagcttttccaaaaatggggttacaagtaactttagcgaccctctaatcgctatctca
ctaacgccaatgtaccgcctaccagtacaacaagagttcgatgtattcttcaaagctggt
cctgcttacatctcgcacggcggtgaaacagacgttgttctttcagccggtatcggtcta
gagaagcaactttcctcagattgggctgttcgtgttgagtaccaatacttcgatgatttc
gatgacaactatgttcaagacttaaactctaactttgttaccgttggccttagctacaac
tttggtacaggtaacacaacggcttcagcagcagccgcttctgcagccgttgtaacacag
gctcctgcagagccaattgccgaaccagaagtcgttgttgttgaagaagaagttgtggtt
actaaagctaaaactgaaagcttctctcaaggtatgtttgagacaaacagcactgaatta
tcttcagaaggcaaaactgcattaataccattagttgaagtactgcaagctcaccctcaa
tcatcagttaatgttgttggtcacactgattcaacaggtgcagcagagtacaacatgatg
atctctaagaagcgtgctgctgctgtagccgcatacattgaagagcaaggcattgcagct
gaccgcattgcagcttcaggtgaaggggaagaaaaccctgtagcatcaaacgctacagct
gaaggtcgtgcgcaaaaccgtcgtgttgacgcaacgatcccaagcttcgaataccaagaa
aaagcgcaaatggaagaagttatcgtagaaactgctgaataa
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