Vibrio atlanticus: VS_II0818
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Entry
VS_II0818 CDS
T00812
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00260
Glycine, serine and threonine metabolism
vsp00460
Cyanoamino acid metabolism
vsp00630
Glyoxylate and dicarboxylate metabolism
vsp00670
One carbon pool by folate
vsp00680
Methane metabolism
vsp01100
Metabolic pathways
vsp01110
Biosynthesis of secondary metabolites
vsp01120
Microbial metabolism in diverse environments
vsp01200
Carbon metabolism
vsp01230
Biosynthesis of amino acids
vsp01240
Biosynthesis of cofactors
vsp04981
Folate transport and metabolism
Module
vsp_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VS_II0818
09102 Energy metabolism
00680 Methane metabolism
VS_II0818
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VS_II0818
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VS_II0818
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VS_II0818
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VS_II0818
Enzymes [BR:
vsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VS_II0818
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CAV26584
UniProt:
B7VSK1
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All DBs
Position
2:894183..895475
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AA seq
430 aa
AA seq
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MNAYQNHSLDSFFSTNLSGTDDAVFAGIQAENTRQNEQIELIASENIVSKAVMQAQGTCL
TNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKQLFKCEYVNVQPHSGAQANGAVKLALLQ
PGDTILGMSLDAGGHLTHGARPAMSGKWFNAVQYGVDRDTLEIDYEAVRALAVESQPKMI
IAGGSAIPRVIDFAKFREIADEVGAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHKT
LRGPRGGMILTNHEDINKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFNTYIDSVI
DNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNVTEEALERAGITCNKNGIPFD
TEKPMITSGIRLGTPAGTSRGFGTEEFKLIGEWIGDVLDGLVESPEGNTEVEQRVRKQVK
ELCKRFPLYR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcttaccaaaaccacagcttagacagttttttctctacgaacctatcaggtact
gacgacgccgtatttgctggaatccaagcagagaacactcgtcaaaacgaacaaatcgaa
cttattgcttctgagaacatcgtttctaaagcagtaatgcaagctcaaggcacttgccta
accaacaaatacgcagaaggctacccaggccgtcgctactatggtggttgtgagcacgta
gataccgttgaagctatcgcaattgaacgtgctaaacagctgtttaaatgtgaatacgta
aacgtgcagcctcactctggcgctcaagcaaacggtgcagtaaaacttgccctacttcaa
cccggcgacacaatccttggtatgtctttagatgctggtggtcacctcacacacggtgca
cgtcctgcaatgtctggtaagtggttcaacgcagttcaatatggcgtagaccgcgacaca
cttgaaatcgattacgaagcagttcgcgctttagctgtcgaaagccaacctaaaatgatt
attgcaggtggtagtgctatcccacgcgttattgatttcgctaagttccgcgaaattgct
gacgaagttggcgctatcctaatggtcgatatggcacacatcgcaggtcttatcgcgaca
ggtgctcaccctagcccactaccacacgcacacgttgttaccacaacaacgcacaaaaca
cttcgtggcccacgcggcggtatgattctgacgaaccacgaagacatcaacaaaaagatc
aactctgcagtgttccctggccttcaaggcggcccactaatgcacgttatcgcggctaaa
gcagtggcgtttggcgaagcacttggcccagaatttaatacttatattgattcagtgatc
gacaacgcaaaagttcttgctgaagtgttgcaaactcgcggttgtgacattgtgactggc
ggtacagacacacatctaatgctggttgaccttcgccctaaaggcttgaaaggtaacgta
actgaagaagcattagagcgtgcagggatcacatgtaacaaaaatggcataccattcgat
acagagaagcctatgattacttctggtatccgtttaggcacgccagctggaaccagtcgt
ggttttggcactgaagaattcaaacttatcggtgaatggatcggtgatgtacttgatggc
ttagttgaaagccctgaaggcaatactgaagttgagcaacgtgttcgcaagcaagttaaa
gagctttgcaaacgcttccctctttaccgttaa
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