Vibrio atlanticus: VS_II0889
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Entry
VS_II0889 CDS
T00812
Name
(GenBank) Conserved hypothetical protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vsp
Vibrio atlanticus
Pathway
vsp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VS_II0889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsp02000
]
VS_II0889
Transporters [BR:
vsp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
VS_II0889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
CAV26711
UniProt:
B7VSS2
LinkDB
All DBs
Position
2:992973..994004
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AA seq
343 aa
AA seq
DB search
MKAFYVSVLASSSFLTGTAFSQQNDIYLYNWDEFLSNSVVTQLGDTYGISLKQQFFSDES
IRDEVLLSERRGAFELVIIESVKLNALAKQNLFHNLSELQQSIAGNIDSRWVEGCGEYGI
PYAWGTAGILYRSDKVNTPTSWNAILEPDTNGSGRISMYYEPTDLVSTALLANQFDPFTN
NEQELRVAYKTLQAQKPHLESNEYVIDYIRQPERLANIDLAYGYSGDSYVLNDLEPDASW
SYAVPQEGTTLWLECIAAINNGELSAQATTILSFLSQPEIAAQNAMDSWFATPSSKAKAL
TTQEYQNDPELFPSKEVLERSYLYQQLEPNSIQIRNRIVDSLR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcattttatgtttctgttcttgcgtcatcatcctttttaactggcacagcgttt
agccaacaaaatgatatttatctctacaattgggatgaatttctatccaatagcgtcgtg
acccaactaggtgacacgtacggcatttctttgaaacaacagtttttttctgatgagtcg
atcagagatgaagtgctattgagcgaacgtcgtggcgcatttgagctagtcattatagaa
agtgtaaagctcaatgcgttagccaagcagaacctgtttcataatctcagtgagttacaa
caatccattgctggtaacatagattcacggtgggttgaaggatgtggcgagtatggcatt
ccctacgcttgggggactgcgggaatcttatatcgcagtgacaaagtaaacactcccacc
tcttggaacgctattctcgaaccagacaccaacggcagtggccgcataagtatgtattac
gaacctacggatttggtgagtactgcactgttagcaaatcaatttgatccattcaccaat
aatgagcaggaacttcgcgttgcctataaaaccctgcaagctcaaaagccacacctagaa
agcaacgaatacgtcatcgactatattcgccaacccgaacgtcttgctaacatcgacctt
gcctacggttattctggtgacagttatgtactcaatgatttggagcctgatgcctcttgg
tcctacgctgtgcctcaagaaggcacaacgttatggttagagtgcattgctgcaattaac
aacggagagttgtctgcacaagcaacaacgattctatcattcttgtcgcaacccgagatc
gccgctcaaaacgcaatggattcatggtttgcaactccaagctcaaaagcaaaagcctta
acaacgcaagagtaccaaaatgatccggagcttttccctagcaaagaggttttagaacgc
agctatctgtatcagcaactcgaacccaatagcattcaaattcgtaaccgcattgtcgac
agtttgagataa
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