Vibrio atlanticus: VS_II1133
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Entry
VS_II1133 CDS
T00812
Name
(GenBank) Vibrioferrin biosynthesis protein PvsE
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00300
Lysine biosynthesis
vsp00470
D-Amino acid metabolism
vsp01100
Metabolic pathways
vsp01110
Biosynthesis of secondary metabolites
vsp01120
Microbial metabolism in diverse environments
vsp01230
Biosynthesis of amino acids
Module
vsp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VS_II1133
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VS_II1133
Enzymes [BR:
vsp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VS_II1133
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CAV27052
UniProt:
B7VSB3
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All DBs
Position
2:1270798..1272000
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AA seq
400 aa
AA seq
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MLNSPQLPVSIRQEIQKLAKQQTQPLCAYLYDLDALELHIKQMRHVLPKNVELFYAAKAN
PSTPILRTLAPYVDGFEAASGGELTHLHQQQLNKPLIFGGPGKMLSELEQAIELDVEAIH
VESLTELKRIGSLTQKLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALM
YLRDFPLIKLKGFHFHLMSHQLDVDRHLALMQRYFQVVKEWKKTFSLDELIINLGGGMGI
NYQNPKQHFPWMEFCDKLEFLISKEHLQDWKLRFECGRYISAPCGYYVMEVLDIKKNLGE
HFVIARGGTHHFRTPAAQSHDHPFAIVKSKQHPTISNPIDQTTATLVGQLCTPKDVLARS
QNIAHIDIGDYVVFTLAGAYAWNISHQNFLMHEPPVFHYF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcttaattcgcctcaacttcctgtgagcatccgccaagaaattcagaaattggccaag
caacaaacgcaaccattatgtgcttatctttatgatctcgatgcattggagctgcacatt
aagcagatgcgccatgtattgccaaaaaacgtagaactattttacgcggcgaaagcgaac
ccttcaacgccgatactgcgcactttagccccttatgttgatggtttcgaagcggcatca
ggcggagagcttacacacctccaccagcaacaactcaataaaccactgatctttggtggc
ccggggaaaatgctaagtgaactggaacaagcaattgaactcgatgttgaggcgattcat
gtagagagcctcactgagttaaaacgcattggttctttaacacaaaagttgaatcgacct
gcttcgatcttcctgcgtatgaacatagacattggtgacatcacacttagcaaattagcc
atgggaggaaagccaaccccgtttggcctcgatgagagtgagttaagtaatgccttgatg
tacctacgcgatttccccttaataaaactgaaaggctttcacttccatttgatgtcacat
caactcgacgttgatcgccacctcgccttgatgcaacgctatttccaagtggtcaaagag
tggaaaaaaacgttctcactcgatgagttgatcatcaacctcggtggtggcatggggatc
aattaccaaaaccctaaacaacattttccttggatggagttttgcgacaaattggagttc
ctgatttccaaggaacatttacaagattggaagctgcgttttgaatgtggccgctacatc
tctgcaccttgtggctattacgtaatggaagtcttggatattaaaaaaaatcttggcgag
cattttgtgattgcccgtggtggcacgcatcatttccgtactccggcagcgcaaagccat
gaccacccttttgcaatcgtgaaaagtaagcagcaccctactatttcaaacccgatagac
cagactacggccacactagttgggcagttgtgcacaccaaaagatgtccttgcacggagt
caaaatatcgctcacatcgacatcggtgactatgtggtgttcacactggctggcgcttac
gcttggaatatctcgcatcaaaacttcttaatgcatgaacctccggtgtttcattatttc
taa
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