Vibrio atlanticus: VS_II1377
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Entry
VS_II1377 CDS
T00812
Name
(GenBank) ABC transporter: ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
vsp
Vibrio atlanticus
Pathway
vsp01501
beta-Lactam resistance
vsp02010
ABC transporters
vsp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VS_II1377
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VS_II1377
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VS_II1377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsp02000
]
VS_II1377
Transporters [BR:
vsp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
VS_II1377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_21
AAA_29
AAA_22
AAA_16
nSTAND3
nSTAND1
RsgA_GTPase
Mg_chelatase
AAA_13
AAA_18
MMR_HSR1
APS_kinase
DUF87
Sigma54_activat
FtsK_SpoIIIE
AAA_23
AAA_7
AAA_33
AAA_10
MobB
P-loop_TraG
DUF2813
Motif
Other DBs
NCBI-ProteinID:
CAV27480
UniProt:
B7VTC3
LinkDB
All DBs
Position
2:1513391..1515019
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AA seq
542 aa
AA seq
DB search
MSDRAILKVNNLSVKFITNDGIIDAVKKINFTLNSSETLAIVGESGSGKSVSSNALMRLL
PDNAIIDAQSEIEFEGQSILKKTEREMQSIRGDRIGMIFQEPMTSLNPYLRVGTQVAEAI
MCHRNVSKSQAKQRVLELFNLVHLPMPEQAYDKYPHEFSGGQLQRIMIAMALINEPDILI
ADEPTTALDVTVQAEVLSLIKEIQSKMGMAILFITHDLGVVKHFADRVLVMCKGELVEEG
LTQELFENPKHDYTRMLINSIPKGAKVPVEASAPELLCADDIRVQFLVKSHFIKSKSQYF
EAVKGISLTLKQGETLGIVGESGSGKSTLGRALIGLLPSTGRIVYKGQDVSLLTDKERHK
LKKDVQMVFQDPYGSLSPRMTVGEIITEGLTVHQPHLSKQERLERARKALIEVRLEPNSI
NRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIDLLKDIQAKHNIGF
LFISHDLSVVKALSDRVLVMQKGEVMEEGSAEEIFNAPKNDYTKKLIAASFDLENKSKKN
AA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccgggccattcttaaagttaacaatctctccgttaaattcataaccaatgat
ggaatcattgatgcggtaaaaaagattaactttactcttaattctagtgaaaccttggcc
attgttggcgaatcgggttcaggtaaatctgtctcttccaacgctttaatgcgtttgctt
cctgataacgccatcattgatgctcaatcggaaatcgaatttgaaggtcagtcgatactc
aaaaagactgaacgagagatgcagtcaattcgtggtgacaggatcggaatgatctttcaa
gaaccaatgacctctctcaacccatacctgcgcgtgggcacacaagtggctgaagccatt
atgtgtcatcgtaatgtatcgaaatctcaagcgaagcagcgtgtgcttgagcttttcaac
cttgtgcatctgccaatgccagaacaggcatacgacaaatacccacatgagttttcaggc
ggccagttgcaacgcatcatgatcgcaatggctctgatcaatgaaccagacattctgatt
gcagacgaaccgactacggctttagatgtaacggttcaggctgaagtgctttctcttatc
aaagaaattcaaagcaagatgggcatggcgattttgttcattacccatgatctcggtgta
gtgaaacactttgccgatcgagtactcgtgatgtgtaaaggggaattggtcgaagaagga
ctcactcaagagctattcgaaaatcctaagcacgattacacacgcatgctgatcaactca
attccgaaaggcgctaaggttcctgtagaagcatcggcaccagagctactgtgtgccgat
gatatccgtgttcaattcttggtgaaatcccacttcattaagagtaagagtcaatatttc
gaagccgtaaaaggcatctcattaaccctaaaacaaggtgaaacattaggcattgttggt
gaatctggatcaggtaaatcaacactaggacgcgcactgatcggcttactgccaagtacc
ggacgtattgtttacaaaggccaagatgtgagtttgttaaccgataaagaacgtcacaag
cttaagaaagatgtacagatggtattccaagatccttatggttctttatcaccacgcatg
acagttggggaaatcatcaccgaaggcttaacggtgcatcaacctcatctatccaagcaa
gaacgtttagaaagagcgcgcaaagcattgattgaagttcgcttagagccgaattcaata
aaccgttatccgcatgagttctctggcggacaaagacaacgtattgcgattgctcgcgcg
ttgattcttgagccatctttcattctattggatgaaccgacttcagcactcgatcgctct
gtacaactgacggtgattgacctgctaaaagatattcaagccaagcacaatatcggcttc
ctattcatcagccacgacctttcggtagtcaaagccttatcggatcgtgtattggtgatg
cagaaaggtgaagtgatggaagaagggtctgcagaagagattttcaatgcaccgaaaaat
gactacaccaagaaattaatcgcagcgtcattcgacttagaaaataaatcgaaaaaaaat
gccgcgtaa
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