Vibrio atlanticus: VS_II1431
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Entry
VS_II1431 CDS
T00812
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VS_II1431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsp03000
]
VS_II1431
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_II1431
Enzymes [BR:
vsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VS_II1431
Transcription factors [BR:
vsp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VS_II1431
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VS_II1431
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DmsR_N
Motif
Other DBs
NCBI-ProteinID:
CAV27576
UniProt:
B7VTH6
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All DBs
Position
2:complement(1573461..1574837)
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AA seq
458 aa
AA seq
DB search
MSRNIHHNSTLTSEQCHLARYARDARFDGMFFTAVKTTGIFCRPICPASPPKEENVEYFS
HQAQALKAGYRPCLRCRPDSAPFSPAWKGVETTFLRALQLIDHGALNSGSIVDLATRLGI
SDRYLRTLFDNYIGVSPKQYSLYSQLMFAKQLLHTSSMSITDVGFASGFNSTRRFNDAFQ
KELQLSPSQIRRAKPSNNLSNHIQLSFHGPLDWDHLLGFYRRRMIEGLEEVGDGYYQRTV
NVNGSKGWFKATLAKESSLDIEFELDDMSQLRSLIANIRRMFDLDVDISKVEDFFSTIDP
NLVAKSGIRIPGVWSAWEAGVRAILGQQVSVTAAIGQLNLLVKELSGEHEKASFPTPKQI
ADADVSFLRMPGSRKETLKRFAQYMVDNEAEHPSKWIDLKGIGPWTIQYALLRGLSEPNH
LLVGDLVVKKFIEHRPAINTESVSPWGSYATFHCWNQS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaaatattcatcacaacagtacgttaacgagtgagcagtgtcatttagctcga
tacgcgcgagatgctcgctttgatgggatgttttttacggcggtaaaaacaaccggaatt
ttttgtcgtccgatttgcccagcaagcccgcccaaagaagaaaatgtcgagtatttttct
catcaagctcaagccttgaaggctgggtatcgcccatgcttacgttgccggccagacagc
gcgcctttttctccggcttggaaaggtgttgaaacgactttcttgcgtgctttacagttg
attgatcatggtgcgctgaactcagggtcaatcgtcgaccttgccactcgattaggtatt
tcagaccgctatttacgaaccttattcgataattacatcggcgtatcaccaaagcaatat
agcctttatagccaattgatgtttgccaagcagttacttcacaccagtagcatgagcatt
accgatgtcggctttgcgagtggctttaatagcacgcgccgcttcaatgatgcctttcaa
aaagagctgcagctctcgccaagtcaaatccgaagagctaagccaagtaacaatctaagt
aatcatatccaactcagtttccatggcccgttggactgggatcatttgctgggcttttat
cgacgacgaatgatcgaaggcttagaagaggtgggcgacggttattaccaacgcacagtg
aacgtgaacggttcgaagggctggttcaaggccactttagccaaagagagcagcttggat
attgagtttgagttggatgatatgagccaattaagaagtttgatcgccaatattcgacgt
atgttcgaccttgatgttgatatcagcaaagttgaagatttctttagtaccattgatccc
aacttggttgccaagagtggtattcgtatccctggtgtgtggagtgcttgggaagccggg
gtaagagcgattctcgggcagcaagtctcggtaacagcggccattggtcagcttaaccta
ttggtgaaagagctttctggtgagcatgagaaagccagcttcccaacacctaaacaaata
gctgatgctgatgtgagctttctaagaatgcctggaagtcgtaaggaaaccttaaagcgt
tttgcccaatacatggtcgataacgaagctgagcatccttctaagtggattgatctcaaa
ggtattggtccttggacgattcaatatgcgctgctgcgcgggctcagtgaacctaaccac
ttgctagtaggcgatttggtggtgaagaagttcattgagcatcgcccagccattaataca
gagagtgtttcgccttggggaagttacgccacgttccattgttggaatcagtcttaa
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