Vibrio atlanticus: VS_II1451
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Entry
VS_II1451 CDS
T00812
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_II1451
Enzymes [BR:
vsp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VS_II1451
DNA repair and recombination proteins [BR:
vsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VS_II1451
Prokaryotic type
VS_II1451
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAV27611
UniProt:
B7VTJ6
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All DBs
Position
2:1593143..1594603
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AA seq
486 aa
AA seq
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MSDILWIRRDLRIHDNPALVSAVENGASIAVFISTPQQWQQHHLAPIKADFIYRHLKQFE
SQLAEFGITLLHLKATDFNDQASQLINLCKQVDATCVYANSEPEVDEQLRDKRLIATGIK
LKITDCDTILPLGSVLNKQGEMFKVFTPFKNAWLKEVQAKGIICSHAPVHSTGSAQAGSS
ETDSLQNLSPQNPTPLNQSLSGFSGEYDFDFPRTDSERWPLSQDVLESVIPNFLANKVND
YSRLRDIPSIKGTSGLSPYLAIGAVSPRWLAIQLIQQQPDLLFDTQLPAFSWLNELIWRD
FYKHLMFHHPILVKGANFQQKYNGLDWYHDNPSFKAWCEGKTGYPLVDAAMRQLVETGWM
HNRLRMVVASFLTKHLLIDWRWGERFFMSHLIDGDFSANNGGWQWASSTGCDAQPYFRIF
NPITQSEKFDPKGIFIRKYIPELQNIPDKHVHFPHDFIAKNGIDSEYWQPIVEHKEARLR
ALAFFK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacattctatggataagacgagacctgaggattcacgataacccagcgctcgtc
tctgcagttgaaaacggcgcctctatcgccgtttttatttcaaccccgcagcaatggcaa
caacatcacctggcaccgataaaagcggacttcatttatcgccacctgaaacagttcgaa
tcacaactcgctgaattcggtatcactctgttgcacctcaaagccacagactttaacgat
caagcttctcaactcatcaacttatgcaaacaggtcgatgcgacgtgtgtgtatgccaat
tcagagccggaagtggatgagcagttaagagacaaacgcttaatcgctactggtataaag
ctgaaaataaccgactgcgatacgattctgccattaggtagcgtgctgaataaacaaggt
gagatgttcaaggttttcacacctttcaaaaacgcatggttaaaagaagtgcaagcaaaa
ggcatcatttgcagccacgctccagtgcattcaacaggatctgcgcaagcaggttcatct
gaaacggattcgcttcagaacctatcacctcaaaacccaacaccactgaatcaatcgtta
agtggtttttctggcgagtacgatttcgactttccgcgtaccgattcggagcgttggcca
ctaagccaagatgtccttgagagcgtgattcccaatttcttagccaataaagttaacgat
tattctcgccttagagacattccctcgataaaaggcacgtctggactatccccttatttg
gcgattggcgctgtaagcccacgttggttagcgattcaattgattcaacaacagccggac
ttgttatttgatactcagttgccagccttttcttggcttaatgaattgatttggcgagat
ttttataagcatttgatgttccatcatcctatactggttaaaggtgcgaactttcagcag
aaatacaacggcttagattggtatcacgacaacccgagctttaaagcgtggtgcgaagga
aaaacaggctacccattagttgatgcagcaatgcgtcaattagttgagacaggctggatg
cacaacaggttaagaatggtggtggcgagcttcctaaccaaacacctgctgattgactgg
cgttggggcgaacgcttctttatgtcgcaccttatcgatggtgatttcagcgcgaataat
ggtggctggcagtgggcctcaagtactggctgtgatgctcaaccctactttagaattttc
aatccaatcactcagagtgaaaagtttgatccaaaaggaatttttattcgtaagtacata
ccagagctgcaaaacatcccagataaacatgttcatttcccgcatgactttatcgctaaa
aacggaatagacagcgaatactggcaacccatcgttgagcacaaagaagcacgattgaga
gccttagccttcttcaaataa
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