Vibrio spartinae: Vspart_00154
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Entry
Vspart_00154 CDS
T07037
Symbol
waaA
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00540
Lipopolysaccharide biosynthesis
vsr01100
Metabolic pathways
Module
vsr_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Vspart_00154 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsr01005
]
Vspart_00154 (waaA)
Enzymes [BR:
vsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Vspart_00154 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Vspart_00154 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
Vspart_00154 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
Vspart_00154 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
vsr01005
]
Lipid A
Vspart_00154 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
PS_pyruv_trans
UCH_N
Motif
Other DBs
NCBI-ProteinID:
QMV12951
LinkDB
All DBs
Position
1:complement(178583..179866)
Genome browser
AA seq
427 aa
AA seq
DB search
MNDFIRLIYTLVLTMIAPFYLLKLFKKKAGKPCVGSRWTEHFGFTPALSTSENQEVIWIH
AVSVGETLSVIPFIKQLHLDFPEKKIIITTTTPTGAEQAQKISAIAEHRYMPLDFPFAIR
GFLQSIKPSHLIMMETELWPNLLHIVKEYGVNVSVINARLSEKSYRGYNRVKPLINMCLP
NIDHLYCQYDEDRNRFLRLGAQASQLFVTGSMKYDIHIAETIVHSAKELRDSLGKTRPVW
IAASTHHGEDQLILQSHQTILKYHPEALLILVPRHPERFNAVYALCTEYGLTTQRRTANF
NAEKPFQIYLGDTMGEMLTLIGASDVCFMGGSLFGDVGGHNVLEPAALGIPTLIGPHYYN
FHEITVTLNSAGVLQVLNHAQNISQAVLNLFDNHKQRLHMSLQAQEVIQQNTGAISKTIN
HIFTEVD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatgactttatccgactaatttatacgctggtgctaaccatgattgcacctttttat
ctcttgaagctattcaagaaaaaagcaggtaaaccttgtgtcggttctcgctggactgaa
cacttcggtttcacacctgctttatccacatcagaaaatcaagaagtcatctggattcac
gctgtatctgtcggcgaaactctcagcgtaatcccatttatcaaacaactacatctcgat
ttccctgagaaaaaaatcatcattacaactacaacgccgacgggtgcagagcaagcacaa
aaaatcagcgctattgcagagcatcgatatatgcctcttgacttcccttttgcgattcgt
ggttttcttcaatcaataaaaccaagtcatttaattatgatggagactgaactctggcct
aaccttctgcatatcgtaaaagagtacggtgtcaatgtatctgtgattaatgcgcgccta
tctgaaaaatcatatcgcggatacaatagagtcaaaccattaatcaacatgtgtctccct
aatatcgaccatctttactgtcagtatgatgaagacagaaatcgctttttacgcttgggc
gctcaagcatcacaactgtttgtcaccggatcaatgaaatacgatatccacatcgcagaa
actatcgtgcattcagccaaagagttgcgcgattctttaggcaaaacaagacctgtctgg
attgctgcaagtacgcatcatggcgaagatcaactcatcctccaaagccatcaaaccatt
ctgaaatatcatccagaggcattactcattttggtacccagacatccggaaaggtttaac
gcagtctatgcgttatgcactgaatatggattgaccacgcaaagacgaacggcaaacttc
aacgccgagaagccatttcaaatctatttaggtgatacaatgggagaaatgctgacgctc
attggcgcatcagatgtctgctttatgggtggaagcttgtttggcgatgtcggtggtcac
aatgttttggagccggcggcactaggtataccaacactcatcgggccccactactataat
tttcatgagattaccgtcacgctaaacagtgcaggtgtgcttcaagtacttaatcatgct
caaaacatcagtcaggcggttctgaacttatttgacaatcataaacagagattacatatg
tcactgcaagcgcaggaggttatacaacaaaataccggtgcaatctctaaaacaatcaac
catatctttactgaagtggattga
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