Vibrio spartinae: Vspart_00161
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Entry
Vspart_00161 CDS
T07037
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00541
Biosynthesis of various nucleotide sugars
vsr01100
Metabolic pathways
vsr01250
Biosynthesis of nucleotide sugars
Module
vsr_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Vspart_00161 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsr01005
]
Vspart_00161 (hldD)
Enzymes [BR:
vsr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Vspart_00161 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
vsr01005
]
Core region
Vspart_00161 (hldD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
KR
adh_short
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QMV12958
LinkDB
All DBs
Position
1:complement(186509..187450)
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKALNDKGFDDILVVDHLKNGKKFKNLVDLSIADYMDRDDFLAQI
MAGDDFGPIEAVFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GETETFIESPEYEGALNVYGYSKQQFDHYVRRLWEDAKANGEKLSQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQMKAGENPKLFEGSHHFIRDFVYVGDVCQVNLWFWEQGISGIFNC
GTGKAESFEEVAKAVIKHHGRGVVETIPFPDHLKGAYQEFTQADLTKLRAAGCDIVFKTV
AEGVSEYLHIINQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaaccggcggtgctggcatgattggcagcaatattgtaaaagccctgaat
gacaaaggatttgacgatatccttgtcgttgaccatctcaaaaacggcaaaaagttcaaa
aacctcgttgacctgagcatagcagactacatggatcgtgatgactttttagcacagatc
atggctggtgatgatttcggtccgattgaagcggtcttccacgaaggtgcttgttcagca
acaaccgaatgggatggtaagtacatgatgctcaataactatgagtattcaaaagaactg
ctccattactgtttagacagagaaattccatttctttatgcatcgtctgcagcgacttac
ggtgaaacagagacattcattgagtcacctgagtacgaaggtgcattgaatgtatatggt
tattccaagcagcagtttgatcactacgttcgtcgtctctgggaagatgcgaaagcaaat
ggtgaaaagctttcacaaatcactgggttccgctacttcaatgtttatggccctcgagaa
gatcataaaggctcaatggcatctgtcgcttttcaccttaacaatcaaatgaaagccggg
gaaaaccccaagctatttgaaggtagtcaccattttatccgtgattttgtgtatgtcggt
gacgtatgtcaggtgaatttatggttctgggaacagggtatttccggtatttttaactgt
ggaacaggaaaagcagagtcatttgaagaagtggcaaaagccgtgattaaacaccatggt
cgtggtgttgttgaaacaattccattccctgaccacctaaaaggtgcctatcaggagttt
acgcaagccgatctgaccaagctacgggcggcaggatgtgacattgtgttcaaaaccgtt
gctgaaggtgtctcagaatatttacacatcattaatcagtaa
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