Vibrio spartinae: Vspart_00274
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Entry
Vspart_00274 CDS
T07037
Symbol
groL
Name
(GenBank) Stress protein H5
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vsr
Vibrio spartinae
Pathway
vsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Vspart_00274 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsr03019
]
Vspart_00274 (groL)
03110 Chaperones and folding catalysts [BR:
vsr03110
]
Vspart_00274 (groL)
03029 Mitochondrial biogenesis [BR:
vsr03029
]
Vspart_00274 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vsr04147
]
Vspart_00274 (groL)
Enzymes [BR:
vsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Vspart_00274 (groL)
Messenger RNA biogenesis [BR:
vsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Vspart_00274 (groL)
Chaperones and folding catalysts [BR:
vsr03110
]
Heat shock proteins
HSP60 / Chaperonin
Vspart_00274 (groL)
Mitochondrial biogenesis [BR:
vsr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Vspart_00274 (groL)
Exosome [BR:
vsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Vspart_00274 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Vspart_00274 (groL)
Exosomal proteins of breast cancer cells
Vspart_00274 (groL)
Exosomal proteins of colorectal cancer cells
Vspart_00274 (groL)
Exosomal proteins of bladder cancer cells
Vspart_00274 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QMV13069
UniProt:
A0ABX6QV71
LinkDB
All DBs
Position
1:316525..318165
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AA seq
546 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVTVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEALKGLSVPCEDNKAIAQVGTISANSDVSVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLESV
AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLELDKTALEDLGQAKRVTITKENTTVIDGAGEAAAIDGRVVQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASQLTELTGDNEEQSVGIRVALRAMESPIRQIVSNAGDEESVVANNIKAGKGNYGYNA
ATGEYGDMIEMGILDPTKVTRSALQFAASIAGLMITTEAMVTEVPKSDGPAMPDMGGGMG
GMPGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaagtttggaaatgatgcacgagtaaaaatgctggaaggtgta
aacgttctggctgacgcagtaaaagtaacattgggccccaaaggccgtaacgttgttctg
gataaatcatttggtgcgccaaccattactaaagatggtgttactgttgcacgtgagatc
gaactggaagataaattccagaatatgggcgcacaaatggtgaaagaagttgcatctcag
gcaaatgatgcagctggtgacgggacaacgactgcaacagttctggctcagtctatcgtc
aatgaaggtctcaaagcggttgctgccggcatgaacccgatggatttaaaacgtggtatc
gataaagcagtgattgctgcggttgaagcgctgaaaggcctgtctgtaccatgtgaagat
aacaaagcgatcgcacaggttggtacaatctctgcgaactctgatgtcagcgtgggtaac
atcattgccgaagcaatggaaaaagtcggtcgcgacggggttatcaccgttgaagaaggt
caagcgctacaagatgagctggatgtcgtcgaagggatgcagtttgatcgtggctacctg
tcaccttacttcatcaacaaccaagaatctggttctgttgagctggacaatccatttatc
ttgttggttgataagaaaatatctaatattcgtgaattactaccagtgcttgaatctgtt
gcaaaagcgtctcgtcctctgctgattgttgcagaagatgttgaaggcgaagcattggcg
acactcgttgtgaataacatgcgcggtatcgtgaaagttgctgctgtgaaggcccctggt
tttggagaccgtcgtaaagcgatgcttcaggatattgcggttttgactggcggtacggtt
atctctgaagaaatcggtctggagttggataaaacagcactggaagatttgggtcaggca
aaacgtgtcactattacgaaagaaaataccacagtcattgacggcgctggtgaagctgct
gcaattgatggtcgtgttgttcagattcgtcaacagattgaagaagcaacatctgactac
gacaaagagaagcttcaagagcgtgttgctaaacttgccggtggtgttgccgtgattaaa
gtgggcgccgcaactgaagttgaaatgaaagagaagaaagaccgtgtcgaagatgctttg
catgcgactcgtgctgctgttgaagaaggtgtcgttgccggtggcggtgtggcactgatt
cgtgcagcttctcaattgactgaactgaccggtgacaacgaagaacagagcgttggtatc
cgtgttgcactgcgtgcgatggagtcgccaattcgtcagatcgtatcaaatgcgggtgat
gaagagtctgttgtggcgaataacatcaaagccggtaaaggtaactatggttataacgct
gctacaggtgaatacggcgatatgattgaaatgggtattcttgacccaacgaaagtaacc
cgtagtgcacttcagtttgcagcatcgattgctggtctgatgattacgactgaagcgatg
gtcactgaagtaccgaagagcgatggcccggcaatgcctgatatgggcggcggcatgggc
ggtatgccaggcatgatgtaa
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