Vibrio spartinae: Vspart_00393
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Entry
Vspart_00393 CDS
T07037
Symbol
tamA
Name
(GenBank) Autotransporter assembly factor TamA
KO
K07278
translocation and assembly module TamA
Organism
vsr
Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsr02000
]
Vspart_00393 (tamA)
Transporters [BR:
vsr02000
]
Other transporters
Pores ion channels [TC:
1
]
Vspart_00393 (tamA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA_TamA_1
POTRA
AAA_assoc
Condensation
Anemone_cytotox
Motif
Other DBs
NCBI-ProteinID:
QMV13185
LinkDB
All DBs
Position
1:430755..432473
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AA seq
572 aa
AA seq
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MRQYFSFFGLLFGLCFSAVSAERQISLSIDGLDGDLYDNVEAYLSSISPNDYAPSLRFQA
RLEDDVSQALQALGYYHPVIRFAFNQEDAEITIHVDSGPPTRIDAVDIQLLGDAQQDEYF
QRVVQASPLKKGEILNHADYEQLKSRLQSLALERGYFNAKFAKNRLEILQADNLARVVLH
FDSGHRYRFGRTIMVGSQIESERVASLQTYRPGDPYLVSKVGEFNQRLASTDWFSSVLVE
PDLSQLDTQQDLPMHVTLTPASQNQIETGAGYSTDVGPTVLLKWNKPWMNNKGHSFSSRF
SLSNPEQLVTASYKIPLEDVLNQYYELQYGLKRVDKLDTKSIESNLSIERHWRLSNGWHR
TLFTRYLIENYELGTLDDVGQFVLPGITFSRTRVRGKRLLTWGDKETLTLEYGNKNLHSE
TDILRIRAGTSWIRTYEERHRGLFRLRGGANLVDDFNQVSPSLRFFAGGDNSIRGYSYES
ISPRDAKGALSGAKYLATASLEYQYNLYDNWWAALFYDYGDAFNSTPNWKRGTGVGVRWV
SPIGPVRLDLAWGLDSTPGDEFHIHFTLGPDL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagacaatatttttcattttttgggttactgtttgggctgtgtttctcagctgtatct
gcggaacgtcagatatccctttccatcgatgggctggacggcgatttgtatgacaatgtc
gaggcctatctatcatctatttctcccaatgactatgccccgagtttacggtttcaggcc
cgtctcgaagacgatgtatcacaggctttacaggcgcttggctactaccatccggtgatt
cgttttgcattcaatcaggaagatgccgaaatcacgattcatgtcgattccggtccgccg
acacgaatcgatgctgtcgatattcagcttttgggagatgcccagcaagatgagtatttt
cagcgtgtcgtacaagccagtccgctgaaaaaaggtgagattctcaatcacgctgattat
gaacagctgaaatcccggctccaaagtctggcgctagagcgcggctactttaatgcgaag
tttgccaaaaatcgtttagaaattttgcaagctgacaatctggcccgggtggtattgcat
tttgatagtgggcaccgctatcgtttcggcaggaccattatggtggggagtcagattgaa
tcggagcgagtcgcgtcgttacagacctaccgacccggagacccatatctggtgtctaaa
gtcggagagtttaatcagcgtctcgcaagtaccgattggttttcttcggtgttggtcgaa
ccggatttgagtcagttggatacacagcaagatttaccgatgcatgtgaccttgacaccg
gccagtcaaaatcagattgaaacgggggccgggtattcaacagacgtcgggccgacggtg
ttactgaagtggaataagccttggatgaataataaggggcatagcttcagtagccgtttc
tcattatcaaatccggaacagctcgtgacagcgagttataaaatccccttggaagatgtg
ttgaatcagtattatgagcttcagtacggtctgaaacgggtcgataagttggatacgaaa
agcattgaatcgaacctctcgattgaacggcattggcgcttgtcgaatggttggcaccgg
acgctatttacacgttatctgattgagaattatgaattgggaacactggatgacgttgga
caatttgttttgccggggattacattttctcggactcgggttcgtggtaagcgcttgctt
acttggggtgataaagaaactctgacgttagaatacgggaataaaaatttgcactcagaa
accgatattttgagaattcgagcggggacgtcgtggattcggacttatgaggaacgccac
cgcggattattccgcttgagaggcggcgccaatttggtcgatgattttaatcaggtttcg
ccatcgctgagattctttgccgggggcgataacagtattcgcggttattcgtatgaatcg
atctcgccgagagatgcaaagggagcgctgagcggtgcaaaatatcttgcgacggcatcg
ctggagtatcaatacaatctctatgataattggtgggcggcactgttttacgattatggg
gatgcattcaactcgacaccgaactggaaaagaggcactggcgttggtgtgcggtgggtt
tccccgatagggccggttcgtcttgatttagcctgggggctggattcaaccccgggcgat
gaattccatattcacttcacactgggaccggatttatga
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