KEGG   Vibrio spartinae: Vspart_00412
Entry
Vspart_00412      CDS       T07037                                 
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
  KO
K06958  RNase adapter protein RapZ
Organism
vsr  Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:vsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vsr03019]
    Vspart_00412
Messenger RNA biogenesis [BR:vsr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Vspart_00412
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_22 Zeta_toxin CPT AAA_16 OCD_Mu_crystall p450
Other DBs
NCBI-ProteinID: QMV13203
LinkDB
Position
1:complement(451058..451924)
AA seq 288 aa
MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVDLLDAFLQSVQGSKQNVAVSIDIRNL
PHDPSLLSDTFSSLKQSVSYNVNVLFLDATEDALLKRYSETRRIHPLSLHNSNLTLAQAI
AQEKHILAPLKQQADMLLDSTNKSIHELSETIRMRVEGRERKHLIIVFESFGFKYGLPTD
ADFVFDVRFLPNPHWQPELRAFTGLDAPVKSFLEQHSEVIDMRQHIQSFIDYWLPSLEKN
NRSYLTIAIGCTGGKHRSVYLTQQIGEYFSQLGHQVQIRHTSLEQHHS
NT seq 867 nt   +upstreamnt  +downstreamnt
atgcgcttaattgttgttagtggtcaatccggtgccggcaagagtgttgccttaagagtg
ctggaagatcttggatactattgtgtcgataacctccccgtcgatttattggatgctttc
cttcaatcggtgcaggggagcaagcagaatgtggcggtcagtattgatatccgaaactta
ccccatgacccgtcactactcagtgacaccttcagctccctgaaacagtccgtctcttat
aatgtcaatgtgctgttccttgatgccaccgaagatgcactactcaaacgctatagtgaa
actcgccggatccatcccctctccttacacaacagtaatttaacgctggcacaagccatc
gctcaagaaaaacacatcctagcaccgttgaaacaacaggccgatatgctgctcgacagt
accaataaatcgattcatgagctgagtgaaacgattcgtatgcgagtcgagggaagagaa
cgtaagcatctgattatcgtctttgaatctttcggcttcaaatatggcttgcccactgac
gctgattttgttttcgacgttcgttttctgcccaatccccactggcaacctgaattacgt
gcatttaccggacttgatgcgcctgtaaaatctttcttggaacaacactctgaggtgatt
gatatgcgccaacatattcagtcattcattgattattggctcccttctttagagaagaat
aatcggagttatctgaccatagccattggctgtaccggtggaaaacaccgttctgtctat
ctgactcaacaaatcggcgaatacttctcccaacttgggcatcaggtacaaattcgccat
acgtctcttgaacaacatcactcttga

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