Vibrio spartinae: Vspart_00488
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Entry
Vspart_00488 CDS
T07037
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00250
Alanine, aspartate and glutamate metabolism
vsr00310
Lysine degradation
vsr00350
Tyrosine metabolism
vsr00650
Butanoate metabolism
vsr00760
Nicotinate and nicotinamide metabolism
vsr01100
Metabolic pathways
vsr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Vspart_00488 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Vspart_00488 (gabD)
00310 Lysine degradation
Vspart_00488 (gabD)
00350 Tyrosine metabolism
Vspart_00488 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
Vspart_00488 (gabD)
Enzymes [BR:
vsr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
Vspart_00488 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
Vspart_00488 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
Vspart_00488 (gabD)
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Motif
Pfam:
Aldedh
Carbam_trans_C
Motif
Other DBs
NCBI-ProteinID:
QMV13264
UniProt:
A0A1N6M3Y0
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Position
1:complement(524380..525810)
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AA seq
476 aa
AA seq
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MMDQIVNKNLLKATCPFSEDAIAILNPATDETLTYIPSVQTTDILTLIEKSKQAQQAWQQ
RSAAERSTILKRWYDLVVENSDDLARIMTLEQGKPLAEAKGEVMYGASFIQWFAEEGKRT
YGDTIPAPASNKRLMTIKQPVGVAAAITPWNFPIAMITRKAAPALAAGCSFIVKPANQTP
LSAYAIAELAYAAGLPKELLIVVNNHSSVAVGDIFCSHDDIKKLSFTGSTQVGSHLIKQC
AETIKRTSMELGGNAPFIVFDDADIDEAVKGAIASKFRNAGQTCVCANRFYVQDSVYDQF
VEKFAEAAADLKVGNGVEPGVIIGPLIDMKAKNSVLGYINTAVEQGAKIAFGGRSLEGLF
VEPTILTEVTQDMEIVHTELFGPVAPIVRFSNDDDLVEKANDTIYGLASYFYTSTLNRAF
RIAEQLEYGMVGINEGIISNEVAPFGGVKQSGFGREGAKQGIDEYLNVKYLCFGGF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccaaattgttaacaaaaacctactcaaagcaacgtgtcctttcagtgaagat
gcgattgcaatcctcaatccggcaaccgatgaaacgctaacttatattccctcggttcag
acaacggatatcctcactttgattgagaaatcaaagcaggctcaacaagcttggcaacaa
cgttcagccgcagaacgctcgactatcttaaagcgctggtatgatctcgtggttgaaaac
agtgatgatctcgccaggattatgaccctcgaacaaggaaaacccttagcagaagccaaa
ggcgaagtcatgtatggtgcctctttcattcagtggtttgcagaagaagggaaacgcacc
tacggtgatacaattccggcaccagcgtcaaacaaacgtttaatgacgattaaacaaccg
gttggtgtggcagcggcgatcacgccttggaattttcctatcgcaatgatcacccgtaaa
gcagcccccgcgctggcggcagggtgtagctttatcgtcaaacccgccaaccaaacccca
ctttctgcctatgccattgcagaattagcgtacgcagcaggattgccaaaagagctctta
atcgtggtgaacaaccactcttcagtggccgttggtgatattttctgtagtcacgatgat
atcaagaagttgtctttcacaggctcgactcaagttggtagtcacctgatcaaacagtgt
gcagaaacgatcaagcgtacctcaatggaattaggcggcaacgcaccatttatcgtcttt
gatgatgcggatatcgatgaagcagtcaaaggtgccatcgcctcaaaattccgtaatgcc
gggcagacctgtgtgtgcgcaaaccgcttctatgttcaggacagcgtttacgaccaattc
gttgaaaaatttgccgaagccgcggcagatctgaaagtcggtaatggcgtggaacccggt
gtgattatcggtccgctgatcgatatgaaagcgaaaaacagtgtgttgggctatatcaat
acagccgtcgaacaaggcgcaaaaatcgcatttggcggccgctctctggaaggtctcttc
gttgaaccgaccattctgactgaagtcactcaagatatggagattgtacataccgaacta
ttcggtccggtcgctccgattgttcgcttttccaacgatgatgacttggtcgaaaaggcc
aacgatacgatttacggattagccagttacttctacaccagtacgctgaatcgtgcattc
cgtattgccgaacagcttgaatacggcatggttgggattaatgaaggcattatctccaat
gaagtcgcaccattcggtggtgtaaaacaatccggctttggccgggaaggtgccaaacaa
gggattgatgaatacctcaatgtcaaatatctctgcttcggcggcttctga
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