Vibrio spartinae: Vspart_00561
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Entry
Vspart_00561 CDS
T07037
Symbol
lpdA
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00010
Glycolysis / Gluconeogenesis
vsr00020
Citrate cycle (TCA cycle)
vsr00260
Glycine, serine and threonine metabolism
vsr00280
Valine, leucine and isoleucine degradation
vsr00310
Lysine degradation
vsr00380
Tryptophan metabolism
vsr00620
Pyruvate metabolism
vsr00630
Glyoxylate and dicarboxylate metabolism
vsr00640
Propanoate metabolism
vsr00670
One carbon pool by folate
vsr00785
Lipoic acid metabolism
vsr01100
Metabolic pathways
vsr01110
Biosynthesis of secondary metabolites
vsr01120
Microbial metabolism in diverse environments
vsr01200
Carbon metabolism
vsr01210
2-Oxocarboxylic acid metabolism
vsr01240
Biosynthesis of cofactors
Module
vsr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vsr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vsr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vsr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Vspart_00561 (lpdA)
00020 Citrate cycle (TCA cycle)
Vspart_00561 (lpdA)
00620 Pyruvate metabolism
Vspart_00561 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
Vspart_00561 (lpdA)
00640 Propanoate metabolism
Vspart_00561 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Vspart_00561 (lpdA)
00280 Valine, leucine and isoleucine degradation
Vspart_00561 (lpdA)
00310 Lysine degradation
Vspart_00561 (lpdA)
00380 Tryptophan metabolism
Vspart_00561 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Vspart_00561 (lpdA)
00670 One carbon pool by folate
Vspart_00561 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vsr04147
]
Vspart_00561 (lpdA)
Enzymes [BR:
vsr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Vspart_00561 (lpdA)
Exosome [BR:
vsr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Vspart_00561 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
FAD_binding_2
HI0933_like
NAD_binding_8
Thi4
FAD_binding_3
AlaDh_PNT_C
DAO
Motif
Other DBs
NCBI-ProteinID:
QMV13336
LinkDB
All DBs
Position
1:605098..606522
Genome browser
AA seq
474 aa
AA seq
DB search
MSKEIKTQVVVLGAGPAGYSAAFRCADLGLDTVIIERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALSEHGIVFGEPSTDIDKIRLWKEKVINQLTGGLSGMAKMRKVNVVNGFGKFT
GPNSIEVEGEDGKTVINFDNAIIAAGSRPIELPFIPHEDPRIWDSTDALELKEVPKKMLI
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRIKDKFSLMLETKVTA
VEAKEDGIYVSMEGKNAPAEAERYDAVLVAIGRTPNGKMLDGEKAGVEVDERGFINVDKQ
MRTNIPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKAEGISYEVATFPWAASGRAIASDCSDGMTKMIFDKDTHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDLALTIHAHPTLHESVGLAAEVFEGTITDLPNAKAKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaatcaaaacccaggtggttgtgctaggtgcaggtcctgctggttactcc
gctgctttccgttgtgccgacttaggtctggatactgtaattattgagcgttacaacacc
ctcggtggtgtatgtttgaatgtcggttgtattccatctaaagctctgttgcatgttgcg
aaagtaattgaagaagcgaaagcattatcagaacacggcatcgtgtttggcgaaccgtca
acagacatcgacaaaattcgtctgtggaaagaaaaagtaatcaatcagttgactggcggt
ctgagcggtatggcgaagatgcgtaaagtgaacgtcgtcaatggctttggtaagtttacg
ggtccgaatagcatcgaagttgaaggtgaagatggcaaaaccgtcattaacttcgataac
gcgattattgctgcgggttctcgtccgattgaattaccatttattccgcatgaagaccca
cgcatttgggattcaactgacgcgctggaattaaaagaagtgccgaagaaaatgctgatc
atgggcggcgggattatcggtcttgaaatgggaacggtttatcatgcgctcggttcacag
attgatgtggttgaaatgtttgatcaggtgattcccgcggcagataaagatgtcgtgaaa
gtgttcaccaaacgcatcaaagacaagttcagcctgatgctggaaaccaaagtgacagcg
gttgaagcgaaagaagatggtatctacgtttcaatggaaggcaaaaatgccccggcagaa
gctgaacgttatgatgcggtactggttgccatcggtcggacaccaaacggtaaaatgctc
gatggtgagaaagccggtgtggaagttgatgagcgcggctttatcaatgttgataaacaa
atgcgtaccaatattcctcatatctttgcgatcggtgacattgttggtcagccaatgctg
gcacacaaaggtgttcatgaagggcacgttgctgctgaggtcattgctggtaagaaacat
tactttgatccgaaagttattccatcaatcgcatatactgagcctgaagttgcatgggtt
ggtaagactgagaaagaagcgaaagcagaagggatcagttacgaagtggcaactttccct
tgggctgcatctggccgcgccatcgcgtctgattgctctgacggtatgacgaagatgatc
ttcgataaagacacgcaccgtgtcattggtggtgcgattgttggtaccaacggtggtgag
ttgctgggtgaaattggtctggcgattgaaatgggttgtgatgctgaagatttggctctc
accattcatgcgcacccaacgcttcatgagtctgttggtttggctgctgaagtttttgaa
ggcaccattacggatctgccaaacgcgaaagcgaaaaagaaataa
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