Vibrio spartinae: Vspart_00585
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Entry
Vspart_00585 CDS
T07037
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase I precursor
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vsr
Vibrio spartinae
Pathway
vsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Vspart_00585 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsr03019
]
Vspart_00585 (pcnB)
Enzymes [BR:
vsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Vspart_00585 (pcnB)
Messenger RNA biogenesis [BR:
vsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Vspart_00585 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QMV13360
LinkDB
All DBs
Position
1:complement(629134..630501)
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AA seq
455 aa
AA seq
DB search
MLMNKNDITEQAHRVYPDLTLNILTRQEHKISRKQISESALKVLYRLQSSGYHAYLVGGG
VRDLLLGESPKDFDITTNATPEQVRKLFRNCRLIGRRFRLAHVMFGREIVEVATFRGHHQ
ENDRQKSSQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYTIHDYAGGIEDIEDR
LIRLIGDPQTRYREDPVRMLRAIRFAVKLDFDIEEETAAPIEALSPLLQDIPSARLYEES
LKMLQTGYGLETYHQMRHYNLFQQLFPMISAYFTEDHSSPTEKMLDLSLDSTDQRIEEGK
RINPAFMFAAILWYPMIHLAETFMESKNLCYYDAVMEAGNKILDQLVKTIAIPRRHTATI
RDIWQLQLRFPRRHGKRAFRLLDINKFRAGFDFLTMRGIVEGGETQELAQWWETFQNAGK
NMRQAMVNDIGRINSKKAKARQRQTGQQKNSQDVP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgaataaaaacgatattacagaacaagctcatcgcgtttatccggatttgacg
ctaaatatcctcacgcgacaagagcataaaatctctcgcaaacaaatcagcgagagcgca
ctcaaagtgctttaccgactgcaaagttcaggctatcacgcctatcttgtcggtggcggc
gtccgtgatcttttactgggggaatccccgaaagatttcgacattacaaccaatgcgaca
cctgaacaggttcgtaagctgtttcgcaactgccgtttgattggccgacgttttcgcctt
gcccatgtgatgttcgggcgtgaaattgtcgaggtcgccacattccgtggtcatcatcag
gaaaacgaccgtcagaaatcgagtcagtcggaagccggaatgctgctccgagacaacgtt
tacggcacaatcgacgaagatgctgaacggcgtgatttcaccatcaatgccatgtattac
aacattgctgattatacgattcatgattacgccggtggcattgaagatatcgaagaccga
ctgatccgtttgattggcgatccgcaaacccgttaccgcgaagatccggtccggatgttg
agagcgatccgctttgcggtcaaacttgatttcgatatcgaagaagaaacagccgccccc
atcgaagcactgtcacccttattacaagacattccttcggcacgactctatgaagagtcg
ctgaaaatgctgcaaactggatatggtctggaaacataccatcaaatgcggcattacaac
ttgttccagcaactgttcccgatgatctccgcctactttaccgaggatcacagttcaccg
acggaaaagatgctcgatctgtcactcgattcgaccgaccaaagaatcgaggaagggaaa
cgaatcaatccggcatttatgtttgcggcgattctctggtatccgatgattcatttggcc
gaaacatttatggaatccaaaaacctctgttactacgatgccgtgatggaagcgggtaac
aaaatattggatcagttggtcaaaacgatcgcgatcccaagacgtcataccgcaaccatt
cgtgatatctggcaactacaactgcgtttcccgcgccgccatggtaaacgggctttccgt
ttactggatatcaataaattccgtgccggtttcgacttcttaaccatgagaggtatcgtc
gaagggggggaaacgcaagaactcgcccagtggtgggaaaccttccaaaatgccgggaaa
aatatgcgtcaggcgatggtgaatgacatcggccgaatcaattccaaaaaggcgaaggca
cgccaacgccaaacgggacagcaaaaaaatagccaggatgtgccatga
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