Vibrio spartinae: Vspart_00619
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Entry
Vspart_00619 CDS
T07037
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vsr
Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsr03016
]
Vspart_00619 (truB)
Enzymes [BR:
vsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Vspart_00619 (truB)
Transfer RNA biogenesis [BR:
vsr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Vspart_00619 (truB)
Prokaryotic type
Vspart_00619 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QMV13391
UniProt:
A0A1N6M4G3
LinkDB
All DBs
Position
1:666265..667203
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AA seq
312 aa
AA seq
DB search
MARRRKGRPVDGIILLDKPTGISSNDALQKVKRIFFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKKYRVIAKLGVRTNTSDSDGEIVETRPVQVSESLLVQSIEKFKGETAQ
IPSMFSALKYQGRPLYEYAREGIEVPRESRQISVYSIELIRHEADEVEMEIHCSKGTYIR
TIVDDLGEMLGCGAHVIYLRRTAVAQYPAERMVTIEALEHILEAAREQDVAPRILLDPLL
LPMDSAVQSLPEVNLIPDLAEMVQKGQAVQVFGIPASGTVRMTVGEEQHFIGVGEIDDDG
KIAPKRLVVFRE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcggaaaggtcgtccggttgatggcatcattttactggataaacctacg
gggatttcatccaatgatgcactccagaaagtgaagcgtattttctttgccgagaaagcc
gggcataccggtgcattagatcctctagcgacggggatgctaccgatttgtctgggggaa
gcgaccaagttttcccaatttctcctcgattcagacaagaagtatcgagtgattgcaaaa
ctgggtgtgcgtaccaatacgtcggattcagatggcgagattgttgagactcggcctgtt
caagtttctgaatcgttattggtgcaatctatcgagaaatttaaaggcgaaaccgctcag
attccttcgatgttttcagcattaaagtatcaaggtcgccctttatatgagtatgctcgg
gaaggcattgaagttcccagagagtcacgtcagatctcggtctattccatcgaactgatc
cgtcatgaagcagatgaagtcgagatggaaattcattgttccaaaggaacttatatccgt
actatcgttgatgatcttggggaaatgttaggctgcggtgctcatgtgatatatttacgt
cgtacggctgtcgcacaatatccggctgagcgaatggtcactatcgaggcgcttgaacat
atccttgaagccgcgcgtgaacaagatgtcgccccaagaattttacttgatccgctcctg
ttaccgatggattcagctgttcagtcattacctgaagtgaatttaattcctgatttggca
gaaatggtccagaaagggcaggctgtgcaagtttttggtataccagcgagtggtacggtg
cgtatgacggttggtgaagaacaacactttattggtgttggtgaaattgatgatgacgga
aaaatagccccgaaacgattagtcgtttttcgtgaatga
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