Vibrio spartinae: Vspart_00630
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Entry
Vspart_00630 CDS
T07037
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
vsr
Vibrio spartinae
Pathway
vsr03030
DNA replication
vsr03430
Mismatch repair
vsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Vspart_00630 (holD)
03430 Mismatch repair
Vspart_00630 (holD)
03440 Homologous recombination
Vspart_00630 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsr03032
]
Vspart_00630 (holD)
03400 DNA repair and recombination proteins [BR:
vsr03400
]
Vspart_00630 (holD)
Enzymes [BR:
vsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Vspart_00630 (holD)
DNA replication proteins [BR:
vsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Vspart_00630 (holD)
DNA repair and recombination proteins [BR:
vsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Vspart_00630 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
QMV13401
UniProt:
A0ABX6QVY5
LinkDB
All DBs
Position
1:677865..678269
Genome browser
AA seq
134 aa
AA seq
DB search
MQERQQYYLQEMGIQSWQLIHPERIPGVVHTPYDLPSSCKLLFVSPVLPEGTQAVMFEKV
LKSFDVSLEEARHVYPHSLDLVVLTHIEWIWFAGCSVPEGITAKLLTSPLLSQIDGHPLH
RRELWRQICSYQAS
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagcgtcaacaatattatttacaggaaatggggattcagagctggcagctcatt
catcctgagcgaattccgggtgtggtccacacaccgtatgatttgccatcatcctgtaaa
ttattatttgtcagtccggttttacctgaaggaactcaggcggtgatgtttgagaaagtg
ttgaagagttttgatgtttctcttgaagaagcacgacatgtctatcctcattcgcttgat
ttggttgttctgactcatattgaatggatctggtttgctggttgttctgtaccggagggg
ataacagcaaaactgctcacgtcacctttgttgagccagattgacggtcatcctttacat
cgtcgcgagctctggcgtcaaatttgttcttatcaggcctcatga
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