KEGG   Vibrio spartinae: Vspart_00960
Entry
Vspart_00960      CDS       T07037                                 
Symbol
spoVD
Name
(GenBank) Sporulation-specific penicillin-binding protein
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
vsr  Vibrio spartinae
Pathway
vsr00550  Peptidoglycan biosynthesis
vsr01100  Metabolic pathways
vsr01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:vsr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Vspart_00960 (spoVD)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Vspart_00960 (spoVD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vsr01011]
    Vspart_00960 (spoVD)
Enzymes [BR:vsr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Vspart_00960 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:vsr01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   Vspart_00960 (spoVD)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer PBP_dimer_2
Other DBs
NCBI-ProteinID: QMV13718
LinkDB
Position
1:complement(1018459..1020348)
AA seq 629 aa
MLLKRSQIRDYKSEDNLFRNRAIISFLAIIILVGVLIANLYTLQVVQFQDYRTRSNDNRI
KIVPIAPNRGLIYDRNGVLLAENRPIFDLEITPEQVDDMNATIQRLRQIIDITPEQVAAF
HKELRQTRRFNSVPILTQLTPEEVAKFSVNQYKYPGVAVTARLKRYYPFGKMLTHVIGYV
SRINDRDIERLKREAKEANYQASRDIGKLGIERYYEDILHGMPGYQEVEVNSRGRVIRTL
KYVPPVPGKDLVLNIDINLQRYVYHLLDGKRGSAVVLDPKDNGVLAMVSSPSYDPNAFVH
GITSKAYRALLSNKDRPLVNRATLGIYPPASTVKPLIAVSALQEGVITPTSTRNDPGYWR
IPNSKTKPFRDWLRWGHGKVNITKALEESVDTFFYQVAYDMGIDRLSRWMKKFGYGEYTG
IDIFEESKANMPTREWKMARHRTPWYQGDTIPVGIGQGYWTATPMQITKAISVLVHHGKV
LAPHFLRATIENGEPFSKRQKAEVETYPPITGVPEKYWDIAINGMYLVNHGPRGTARHAF
KHLKYKSAGKSGTAQVFGLAEGEEYNADDLAEHLRDHALFTGFAPVDHPKAIVTIVLENA
GGGSSHGAPVVRKIFDHVILDEDQQEKKN
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgcttctcaaacgcagtcagatccgagactacaagtcagaagacaatctgtttcggaac
agagctatcatttcgtttttagcgattatcattctggttggtgtgttaatcgcaaacttg
tatacccttcaggtggtgcaatttcaggattacagaacccgctctaacgataaccggatt
aaaattgtccctatcgccccgaaccgcgggctaatttatgatcgcaatggggtcttactg
gcagaaaatcgtcctattttcgatttggaaattacaccggaacaagtcgatgatatgaat
gcgaccattcagcgattaagacaaatcattgatattaccccagaacaagtcgccgctttc
cacaaagaattacgtcaaacccgacgctttaactcggtgccgattctgacgcaattgaca
ccagaagaagtcgctaaattttcggtgaatcaatacaaatatccgggtgttgcagttacg
gctcgtctgaaacgttactacccttttggtaaaatgctgacccacgtgatcggctatgtc
tcccggatcaatgaccgcgatattgaacgcctgaaacgagaagcaaaagaggcaaactat
caggcatcccgtgacatcggtaagttgggtatcgaacgctattacgaagatattctacat
ggcatgccgggatatcaggaggttgaagtcaacagtcgtggacgcgtcatccgcaccctc
aaatatgtgccgccggtgccgggtaaagatctggtactgaatattgacatcaacttacag
cgttacgtctatcatttgcttgatggaaaaagaggctcagcggtcgtccttgatccaaaa
gacaatggtgtactcgcaatggtttccagcccaagctatgaccccaatgcctttgtccac
ggcatcaccagcaaagcttatcgggcactgttgagtaataaagatcgtcctttggtcaat
cgtgccacattagggatctatccaccggcatccactgtcaaaccgttaattgccgtgtct
gcattgcaagaaggggtcatcaccccaacctctactcgcaatgatccgggatactggcga
attcccaattcaaaaactaaacctttccgagattggctcagatggggacatggtaaagtc
aacatcaccaaagcattggaagagtccgttgatacattcttttatcaagtcgcttacgat
atgggcatcgatcggctgtctcgctggatgaaaaaattcggttacggagaatataccggc
attgatatcttcgaagaaagtaaagccaatatgccgaccagagagtggaagatggctcgt
caccgaaccccttggtatcagggagacaccattcctgttgggatcggtcagggctattgg
acagcaacaccgatgcaaatcacgaaagcaatatcggtcttagtccaccatggtaaggtc
ctcgcgccacatttccttcgggcaaccattgaaaatggagaaccctttagcaagcggcag
aaagcagaagttgaaacctatccacccattactggcgtaccggaaaaatactgggacatc
gcaatcaatggtatgtatctggtcaatcatggtcctcgcggaacggcacgtcatgcattc
aagcatctcaaatataaaagtgccggtaagtcagggacggctcaggtattcggtctcgcg
gaaggggaagaatataatgcagacgatcttgcagaacacttacgcgaccatgcactattc
actggatttgcccccgtcgatcatccgaaagccattgtcactatcgtcttggaaaatgcg
ggaggcggctccagtcatggtgctcccgtcgtgcgaaaaatcttcgatcacgttattcta
gatgaagaccaacaagagaagaaaaactaa

DBGET integrated database retrieval system