Vibrio spartinae: Vspart_00960
Help
Entry
Vspart_00960 CDS
T07037
Symbol
spoVD
Name
(GenBank) Sporulation-specific penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00550
Peptidoglycan biosynthesis
vsr01100
Metabolic pathways
vsr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Vspart_00960 (spoVD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Vspart_00960 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsr01011
]
Vspart_00960 (spoVD)
Enzymes [BR:
vsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Vspart_00960 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vsr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Vspart_00960 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QMV13718
LinkDB
All DBs
Position
1:complement(1018459..1020348)
Genome browser
AA seq
629 aa
AA seq
DB search
MLLKRSQIRDYKSEDNLFRNRAIISFLAIIILVGVLIANLYTLQVVQFQDYRTRSNDNRI
KIVPIAPNRGLIYDRNGVLLAENRPIFDLEITPEQVDDMNATIQRLRQIIDITPEQVAAF
HKELRQTRRFNSVPILTQLTPEEVAKFSVNQYKYPGVAVTARLKRYYPFGKMLTHVIGYV
SRINDRDIERLKREAKEANYQASRDIGKLGIERYYEDILHGMPGYQEVEVNSRGRVIRTL
KYVPPVPGKDLVLNIDINLQRYVYHLLDGKRGSAVVLDPKDNGVLAMVSSPSYDPNAFVH
GITSKAYRALLSNKDRPLVNRATLGIYPPASTVKPLIAVSALQEGVITPTSTRNDPGYWR
IPNSKTKPFRDWLRWGHGKVNITKALEESVDTFFYQVAYDMGIDRLSRWMKKFGYGEYTG
IDIFEESKANMPTREWKMARHRTPWYQGDTIPVGIGQGYWTATPMQITKAISVLVHHGKV
LAPHFLRATIENGEPFSKRQKAEVETYPPITGVPEKYWDIAINGMYLVNHGPRGTARHAF
KHLKYKSAGKSGTAQVFGLAEGEEYNADDLAEHLRDHALFTGFAPVDHPKAIVTIVLENA
GGGSSHGAPVVRKIFDHVILDEDQQEKKN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcaaacgcagtcagatccgagactacaagtcagaagacaatctgtttcggaac
agagctatcatttcgtttttagcgattatcattctggttggtgtgttaatcgcaaacttg
tatacccttcaggtggtgcaatttcaggattacagaacccgctctaacgataaccggatt
aaaattgtccctatcgccccgaaccgcgggctaatttatgatcgcaatggggtcttactg
gcagaaaatcgtcctattttcgatttggaaattacaccggaacaagtcgatgatatgaat
gcgaccattcagcgattaagacaaatcattgatattaccccagaacaagtcgccgctttc
cacaaagaattacgtcaaacccgacgctttaactcggtgccgattctgacgcaattgaca
ccagaagaagtcgctaaattttcggtgaatcaatacaaatatccgggtgttgcagttacg
gctcgtctgaaacgttactacccttttggtaaaatgctgacccacgtgatcggctatgtc
tcccggatcaatgaccgcgatattgaacgcctgaaacgagaagcaaaagaggcaaactat
caggcatcccgtgacatcggtaagttgggtatcgaacgctattacgaagatattctacat
ggcatgccgggatatcaggaggttgaagtcaacagtcgtggacgcgtcatccgcaccctc
aaatatgtgccgccggtgccgggtaaagatctggtactgaatattgacatcaacttacag
cgttacgtctatcatttgcttgatggaaaaagaggctcagcggtcgtccttgatccaaaa
gacaatggtgtactcgcaatggtttccagcccaagctatgaccccaatgcctttgtccac
ggcatcaccagcaaagcttatcgggcactgttgagtaataaagatcgtcctttggtcaat
cgtgccacattagggatctatccaccggcatccactgtcaaaccgttaattgccgtgtct
gcattgcaagaaggggtcatcaccccaacctctactcgcaatgatccgggatactggcga
attcccaattcaaaaactaaacctttccgagattggctcagatggggacatggtaaagtc
aacatcaccaaagcattggaagagtccgttgatacattcttttatcaagtcgcttacgat
atgggcatcgatcggctgtctcgctggatgaaaaaattcggttacggagaatataccggc
attgatatcttcgaagaaagtaaagccaatatgccgaccagagagtggaagatggctcgt
caccgaaccccttggtatcagggagacaccattcctgttgggatcggtcagggctattgg
acagcaacaccgatgcaaatcacgaaagcaatatcggtcttagtccaccatggtaaggtc
ctcgcgccacatttccttcgggcaaccattgaaaatggagaaccctttagcaagcggcag
aaagcagaagttgaaacctatccacccattactggcgtaccggaaaaatactgggacatc
gcaatcaatggtatgtatctggtcaatcatggtcctcgcggaacggcacgtcatgcattc
aagcatctcaaatataaaagtgccggtaagtcagggacggctcaggtattcggtctcgcg
gaaggggaagaatataatgcagacgatcttgcagaacacttacgcgaccatgcactattc
actggatttgcccccgtcgatcatccgaaagccattgtcactatcgtcttggaaaatgcg
ggaggcggctccagtcatggtgctcccgtcgtgcgaaaaatcttcgatcacgttattcta
gatgaagaccaacaagagaagaaaaactaa
DBGET
integrated database retrieval system