Vibrio spartinae: Vspart_00961
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Entry
Vspart_00961 CDS
T07037
Symbol
rlmH
Name
(GenBank) Ribosomal RNA large subunit methyltransferase H
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
vsr
Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsr03009
]
Vspart_00961 (rlmH)
Enzymes [BR:
vsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
Vspart_00961 (rlmH)
Ribosome biogenesis [BR:
vsr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Vspart_00961 (rlmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
QMV13719
LinkDB
All DBs
Position
1:complement(1020355..1020825)
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AA seq
156 aa
AA seq
DB search
MKIQLVAVGTKMPQWVEQGFNEYQRRFPHDMPLELIEIPAGKRGKNADIPRILDKEGEAM
LAAIPKGHRIVTLDIPGKRWDTHQLAQQMESWKLDGRNVSILIGGPEGLSPACKQAAEQS
WSLSPLTLPHPLVRIVMAESLYRAWSVTTNHPYHRE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattcagctagttgccgtgggcacaaaaatgccccaatgggttgaacagggattc
aatgaatatcaacgccgcttcccgcatgatatgcctttagagctcattgaaatccccgcc
ggaaagcgtggtaaaaacgcagatatccccagaatactggataaagaaggggaagcgatg
ctcgctgcgattccgaaaggacatcgtattgtcacgctcgatattccgggaaaacgctgg
gatacccatcaactggcacaacagatggaaagctggaaattagatggccgtaatgtctca
atcttaattggtgggcccgaagggttatcaccggcctgcaaacaagccgcagaacaaagc
tggtctttatcgccactcacactccctcatcctttagtccgtattgtgatggctgaaagt
ttgtaccgtgcctggagcgtcacaaccaaccatccttatcatcgagaataa
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integrated database retrieval system
