Vibrio spartinae: Vspart_00999
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Entry
Vspart_00999 CDS
T07037
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vsr
Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsr03016
]
Vspart_00999 (truA)
Enzymes [BR:
vsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Vspart_00999 (truA)
Transfer RNA biogenesis [BR:
vsr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Vspart_00999 (truA)
Prokaryotic type
Vspart_00999 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QMV13757
LinkDB
All DBs
Position
1:1066101..1066907
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AA seq
268 aa
AA seq
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MMRIALGVEYHGAHYYGWQRQREVPSVQEALEKALSQVANHPIAVQCAGRTDAGVHGTGQ
VVHFDTEAQRKTAAWTMGTNANLPQDIAVRWAQEVPDSFHARFSATARRYRYVIYNDNLR
PGILSAGVSHYHGDLCVERMHQAGQLLLGENDFTSFRAVHCQSRSPWRNVMHLQVTRHNR
YVVIDIKANAFVHHMVRNIAGSLIAVGRGEQEPEWIQWLLAAKDRKLAAATAKAEGLYLV
EVEYPQAFNLPEQPVGPLFLPDTLNESR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaatcgctttaggtgttgagtatcatggcgctcattattatggctggcagcgg
cagcgagaagttcctagtgttcaggaagctttggaaaaagcactgagccaagtcgcgaat
catccgatagcggttcagtgtgccgggcgaactgatgcaggtgttcacggtacgggacaa
gttgtccattttgataccgaggctcagcgaaaaacggcagcatggacgatgggtacgaat
gcgaatttaccccaagatattgctgtacgatgggcacaggaagttccggattcgtttcat
gcgcgtttttcagcgacagcgcggcgttatcggtatgtgatatacaatgataatttgcga
cccggcattttgtcggctggtgtcagtcattatcatggtgatttatgtgtcgaaaggatg
caccaagccgggcagttgttactgggggaaaatgattttacctccttcagagccgtacat
tgccaatctcgcagcccgtggcggaatgttatgcatttgcaagttactcgccacaatcgt
tatgttgtgattgacattaaggccaatgcgtttgtacaccatatggtcagaaatatcgcg
gggagcttaattgctgtcggcagaggagagcaggagcctgaatggattcaatggctattg
gcagctaaagatcggaaacttgcggctgcaacagcaaaagcagagggactttatttggtt
gaagtcgagtacccacaagcattcaatctaccggagcaacctgttggtccgttattttta
cctgatacattgaacgaatcgcgttag
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