Vibrio spartinae: Vspart_01061
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Entry
Vspart_01061 CDS
T07037
Symbol
fadJ
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00071
Fatty acid degradation
vsr00280
Valine, leucine and isoleucine degradation
vsr00310
Lysine degradation
vsr00362
Benzoate degradation
vsr00380
Tryptophan metabolism
vsr00410
beta-Alanine metabolism
vsr00640
Propanoate metabolism
vsr00650
Butanoate metabolism
vsr00907
Pinene, camphor and geraniol degradation
vsr00930
Caprolactam degradation
vsr01100
Metabolic pathways
vsr01110
Biosynthesis of secondary metabolites
vsr01120
Microbial metabolism in diverse environments
vsr01200
Carbon metabolism
vsr01212
Fatty acid metabolism
Module
vsr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Vspart_01061 (fadJ)
00650 Butanoate metabolism
Vspart_01061 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
Vspart_01061 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Vspart_01061 (fadJ)
00310 Lysine degradation
Vspart_01061 (fadJ)
00380 Tryptophan metabolism
Vspart_01061 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Vspart_01061 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Vspart_01061 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Vspart_01061 (fadJ)
00930 Caprolactam degradation
Vspart_01061 (fadJ)
Enzymes [BR:
vsr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Vspart_01061 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Vspart_01061 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Vspart_01061 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF608
Motif
Other DBs
NCBI-ProteinID:
QMV13816
LinkDB
All DBs
Position
1:1128634..1130781
Genome browser
AA seq
715 aa
AA seq
DB search
MAELHYSEPGSFHLTIEDDLAWLALDVPEESMNTLKASFSDEIDAILTDLLQAAQRVKGL
VIYSRKADNFIVGADITMFEQCQSADDAASLAKMGQDIFHKIEALPFPVVAAIHGACLGG
GLELALACDYRVCSDDPATALGLPEVQLGLLPGSGGTQRLPRLIGLLPALDLILTGKNVR
SKKALKLGLVNACVAQDGLLNAARMIIEKPTNFKTRSSWKKRLTRGVLALKTVRHWVIKQ
ARKKAQAKAKHHYPAIDAILDVIRQGFDDGMSAGLIKEAQTFGRLAMTSESQALRSIFLA
TSALKREMKADDRVKEVHHVSILGGGLMGAGIGYVTVDKAKKRLRIKDVSHQGVLHAFQY
IYQRLNKKCQRRYLSEADVRAAMATVSGGIDFSGFGETDVVIEAVFEDLKLKQEMVASVE
SHTREHTIFASNTSSLPIHDIASHAARPENIVGLHYFSPVEKMPLVEVIPHQGTSPETIA
TVVRLAYQQGKTPVIVQDRAGFYVNRILALYINGAVQCLIDGEPIEKIDQALVDFGFPVG
PMTLLDEVGFDVAFKISPILVQELGERFLTPPALAQLISDGRKGRKSGLGFYRYKGKKKQ
PDRSIYRQLKIREQVSLSHHDIALRCVLPLLNEAVMCLDQSVIRNARDGDIGAIFGIGFP
PFLGGPFRYMDQVGLQLIVEQMQTLSGDLCQPCPALMARLENQQLFYAEERPKTK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactgcattattctgagccgggaagttttcatctgacgattgaagacgatctc
gcttggctggcgctggatgtgccagaggaaagcatgaatacactgaaagcatcctttagc
gatgagattgatgccattctgacggatttgttgcaagcggcgcagcgcgttaaagggtta
gtgatttattcccgcaaagcggataatttcattgtcggtgccgacatcaccatgttcgag
cagtgccaatcggccgacgatgctgcgagtctggcaaagatggggcaggatattttccac
aaaatagaagcgttgccgtttccggttgttgctgcgattcatggcgcatgtctgggtggc
ggtcttgagctggcattagcgtgtgattatcgcgtatgtagtgatgatccagccacggct
ttggggttgccagaagttcagttgggcctgttacccggctcaggtggtacgcaacgactc
ccgcgcctgattggattactgcccgcactcgatctgattctgacgggtaaaaacgtccgc
agtaaaaaagcattgaaactgggtctggtcaacgcttgtgttgcgcaagatggcttattg
aatgctgcgcggatgatcatcgaaaaaccgaccaactttaagacccgctcaagctggaaa
aagcgcctgacgagaggtgtgctggcgttgaagactgtccgccattgggtgatcaaacag
gctcgcaagaaagcgcaggcaaaggcgaagcatcattatcctgcgattgatgccattttg
gatgtcatccgacaaggctttgatgacggcatgagtgccgggctgatcaaagaggctcaa
acgtttggtcgcttggcgatgaccagtgaatctcaggcattacggtctattttcctcgct
acatctgcgctcaaacgggaaatgaaagcggatgatcgggtgaaagaggttcaccatgtc
tcgattttaggtggcggactgatgggcgccggtatcggctatgtgacggtcgataaggcg
aaaaagagactcagaatcaaggatgtcagtcatcagggcgtgcttcacgcatttcagtat
atctatcaacgtttgaataaaaaatgtcagcgcaggtatctctctgaagctgatgtccgg
gccgcaatggcgacggtctctggcgggatcgatttttccggctttggcgaaaccgatgtc
gtgattgaagctgtgtttgaagatttaaaactgaaacaagagatggtggcgtcggttgaa
tcacatacccgggagcacacaatttttgcgtcaaatacctcttctttgccgattcatgac
attgcgtctcatgctgcccggccagaaaatattgtcggtttacactattttagtccggta
gagaaaatgccgttggttgaagtgattcctcatcaagggacatcccctgaaacgattgcg
acggttgtccggttagcctaccaacaagggaaaacaccggtcattgttcaggaccgagcc
ggattttatgtcaatcgcattctcgcgctctatattaatggcgcggtacagtgtttgatt
gatggcgagccaatcgagaaaattgatcaggcgttggtcgatttcggctttccggtcggt
ccgatgacgttacttgatgaggtcgggtttgatgtggcctttaagatctcaccgattctc
gttcaagagctgggtgagcgtttcctcacaccaccggcattggcgcagctaatcagcgat
gggagaaaaggacggaagtccggattgggattttatcgctataaaggcaagaagaaacag
ccggatcgttcgatttaccgtcagctaaaaattcgcgaacaagtttcactcagtcatcac
gatattgcattgcgctgtgtacttcctctcttgaatgaagcagtgatgtgtcttgaccaa
tcggtgattcgcaatgctcgtgacggggatatcggtgccattttcggaattggtttcccg
ccgtttttaggggggcctttccgttatatggatcaggtcgggttacagctgattgtcgag
caaatgcagacgctgtctggtgatctttgtcagccatgtcctgcgttaatggcgcgtctg
gagaatcagcaactgttttatgcagaggaacgtccaaagacaaaatga
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