Vibrio spartinae: Vspart_01209
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Entry
Vspart_01209 CDS
T07037
Symbol
rpfC_2
Name
(GenBank) Sensory/regulatory protein RpfC
Organism
vsr
Vibrio spartinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
HAMP
RNase_Y_N
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
QMV13962
LinkDB
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Position
1:1313833..1316922
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AA seq
1029 aa
AA seq
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MLKIRSFEHWSITTKITVSVILLVFLNIGVSAVHFYSLTQLKKSVEMISYASAVMASVNE
AAERVEHFISSHDPTRLDEVKTIIEENVKTLAHLDLSEVDSVHVKEVSALKRRMRYFSNT
VDILGLATDMMNTETSNMTRQQTQLQNVATAIETDLTQRREQLERRMNLQDEGTDEMLRA
HQIIQSLRGGLHKMSSMLLPDTVGNIEPPLKDIRQALQAMFPVVNMLKENYAQERWFSAI
KQLEQALILTREDVKALKETPSERRGVYAQMLAHLKTIEQLINQLESRVSVREGELDQML
DYLRTELGLQQNAVNVSRRFSERVAYLEAKTLTFLLRSTDDEAALVYETLDQLSHYARIL
PSVNISESSQNAVVTVNALIDGYRDAFIRFRQASYALSRVHMKVRDEADRTSSLVSQFAK
EQQVTADKHNAWSELSGTIVGGITALTALFIAWSTSRLIARPIISLSAVMRQLAAGELDV
NITGVGRQDEVGTMSRAVKVFQENAVKVRAMEAEAESERQQIMAQLEQRVVERTEDLQHK
TEQLEAQARELDRARIQAEAATHSKSVFLANMSHELRTPLNTILGYAQLIYRASELNEQQ
KEGLNTILQSGHHLLTLINDLLDLSKIEAGRMEMTPEAIDLSRCFQSVLEIIRIKAAEKG
LTLKLQVMPQTLPWVFLDEKRLRQVLLNLLGNAVKYTDTGHIDLNVRAESIDMGASVRVT
FSVEDSGVGIDPEMQDVIFRPFERVGDKKRRIIGTGLGLAISQQLVKQMGGEIQVKSQAG
MGSQFFFTLDLPVVTEKREQDVRSGQAQIIGYEGSRKQILIVDDVLENRMLLVDLLSDIG
FETCEATEGEAGIEQASAKRPDLILMDIVMPVMDGLEATRHIRLMPALEATPILIVSASA
SQTEFTQGKEAGASGFVSKPIDRHQLLIQIGELLDLTWIVDEQTSELEASSKVSDTSEWV
VPPRTQLEELHHLALIGNMRHLRDWAEDLQTEDPRYHAFATHLIDMTKSFQSRAILLLVN
ELLERKPAI
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatcaggtcatttgagcattggtcaattaccaccaagattaccgtatcggtg
attttgttggtcttcctcaatatcggcgtctcggcggttcacttctatagtctgactcag
ttgaaaaaatcagtggaaatgatcagttacgcttcagcggtgatggcttctgtcaatgaa
gcagcggaacgggttgaacactttatctcttcccatgaccccacccgcctggatgaagtc
aaaacgattattgaagaaaatgtaaaaacgctcgctcatctggatttgagtgaagtggat
agcgttcatgtgaaagaggtctccgcactgaaaagacggatgcgctacttctccaatacg
gtcgatatcttaggattagcgactgacatgatgaataccgaaaccagcaatatgactcgc
cagcagacgcagttgcaaaacgtcgccactgcgattgaaactgatctgacgcaacgacga
gagcagcttgagcgacggatgaatttgcaggatgaaggcaccgatgagatgctccgggcc
caccagattatccagagtctgcgtggggggctgcataaaatgtcatcaatgctgttgccg
gatacggtcgggaacattgagccgccgctcaaagacatcaggcaggctttgcaagcaatg
tttccggtcgtcaatatgctcaaagaaaactatgctcaagagcggtggttcagtgcgatc
aaacaactggaacaggcgcttattctcacccgagaagacgttaaggcactgaaggaaacc
ccatcagagcgccgtggtgtttatgcgcagatgctggctcatcttaaaaccattgaacaa
ctgatcaatcagcttgagagtcgagtgtctgtacgagagggtgagctggatcagatgctg
gattaccttcgaaccgagctgggattacagcaaaacgccgtcaatgtttccagacgattc
tcggagcgggtggcctatttggaagccaaaacattgacttttctgctgcgctcaacagat
gacgaggcggctctcgtctatgaaacattggatcaactgagtcattacgcgcgtattttg
ccctcggtgaatatttcggagtcatcccagaacgcggtggtgaccgtcaatgctttgatc
gatggttaccgggatgcgtttattcggtttcgacaggcaagctatgcgttgtcccgggtt
cacatgaaagttcgtgatgaagcagaccggacatcatcactggtctctcagtttgccaaa
gaacaacaagtcacagcggacaagcataatgcatggagtgagttatcagggacgattgtt
ggcgggatcacagcattgacagcactgtttattgcctggtcaacctctcgtttaattgcc
cgcccgattatttcactgtccgcagtgatgcgtcagttagcagcaggtgagcttgacgtt
aatatcacgggggtggggcgtcaggatgaagtcggcaccatgtcccgtgcggtgaaagtc
tttcaggaaaatgcggtgaaagtccgggcaatggaagcggaagcagaatcggaacgacaa
cagatcatggcacaactggagcagcgggttgtggaacggacggaagacttacagcataaa
actgaacagttggaagcccaagcgcgtgaactggatcgcgcgcgcattcaggctgaagcg
gccactcattctaaatcagtttttctggcgaatatgagtcatgaactgagaacaccttta
aataccattctcggttatgcgcaattgatctaccgggcatctgaattaaacgagcagcaa
aaagagggactgaataccattctccagagtggtcatcatttactgactctgattaatgac
ctgttggatttgtcgaagattgaagccgggcggatggaaatgactccggaggccattgat
ttgtcgcggtgttttcaaagtgtacttgagattattcggatcaaagccgcggagaaaggt
ttaacgctcaaacttcaggtgatgcctcaaacactgccttgggtttttctggatgaaaaa
cgtctgcgtcaggtattgctgaatttgttaggcaatgcggtgaagtataccgatacgggc
catatcgacctcaatgtgcgcgctgaatccattgatatgggcgcgtctgtccgggtcact
ttctcggtcgaagatagtggggttgggattgaccctgagatgcaggacgttatttttcgt
ccttttgaacgggtcggtgataaaaaacgccggatcatcgggacggggcttggccttgcg
attagccagcaactggttaagcagatgggcggtgagattcaggtcaaaagccaggccggg
atggggagccagtttttctttacgctggatttgccggtggtgacggagaagcgtgagcag
gacgtccgttccggccaagcacagattattgggtatgaaggcagccgtaagcaaattctg
attgttgatgatgtgctggagaatcgcatgttactggttgatttattgagtgacattgga
tttgagacctgtgaagccaccgagggggaggcggggattgagcaagcgtctgcgaagcgg
ccggatttgattctgatggatattgtgatgccagtgatggacgggttggaagcgacgcgg
catatccgactcatgccagcgctggaagcaacaccgatattgattgtttctgccagcgcg
tcgcaaaccgagttcacacagggaaaagaggccggggccagtggttttgtgagtaaaccg
attgatagacaccagttactgattcagatcggtgagctgttggatctcacatggatcgtt
gatgaacagacatcagaattggaagcatcatcaaaggtgtccgatacttcagaatgggtg
gtgccaccaagaacgcaattagaggaacttcatcatttggcattgatcggcaatatgcgt
catctccgcgattgggctgaggatttgcagactgaagaccctcgctatcacgcttttgct
acccatttgattgatatgacgaagtcgttccaatctcgggcgatcttgttattggtcaat
gagttgttggaaaggaaacctgctatatga
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