Vibrio spartinae: Vspart_01229
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Entry
Vspart_01229 CDS
T07037
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00061
Fatty acid biosynthesis
vsr00071
Fatty acid degradation
vsr01100
Metabolic pathways
vsr01212
Fatty acid metabolism
vsr02024
Quorum sensing
vsr04146
Peroxisome
Module
vsr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Vspart_01229 (fadD)
00071 Fatty acid degradation
Vspart_01229 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Vspart_01229 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vspart_01229 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vsr01004
]
Vspart_01229 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vsr04147
]
Vspart_01229 (fadD)
Enzymes [BR:
vsr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Vspart_01229 (fadD)
Lipid biosynthesis proteins [BR:
vsr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Vspart_01229 (fadD)
Exosome [BR:
vsr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Vspart_01229 (fadD)
Exosomal proteins of breast cancer cells
Vspart_01229 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QMV13982
LinkDB
All DBs
Position
1:1336641..1338332
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AA seq
563 aa
AA seq
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MEHPWLARYPNDVPETINPDVYSSLVEMFEQSITKYADQPAFVNMGTVMTFRKLEERSRA
FAAYLQNELQLKKGDRVALMMPNLLQYPVALFGVLRAGLVAVNVNPLYTPRELEHQLNDA
GITTIVIVSNFAGTLQKIVQRTAVKHVILTSLGQMLPRAKGTVVDFVVKYIKKMVPHYHL
PDAVSMRTALKRGRHMQYIKPVIESDDTAFLQYTGGTTGIAKGAILSHRNMVANVLQAKA
AYGPILTEGRELVVTALPLYHVFALSVNCLLFVELGGQNLLITNPRDIPGFVKELQRYPV
TAITGVNTLFNALVHNESFRHMDFSQLHLSVGGGTAVQRAVADEWKKVTGIHLLEGYGLT
ECSPLVAGNPYDLSDYSGAIGLPVPSTDVRIVDEHGQVIGFDQTGELQVRGPQVMRGYWQ
REDATREVLTDDGWLSTGDIVRMDDQGMLYIVDRKKDMILVSGFNVYPNEIEDIVSMHDK
VLEAAAIGQPHDVSGEVVKLFVVKKDTSLTKEEIIAHCRQYLTGYKIPKLIEFREELPKT
NVGKILRRALKDENQVMLSMEQA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtggagcatccatggcttgcacgttacccaaatgatgtgcctgaaactattaatccagat
gtttattcatctctggttgagatgtttgaacagtcgatcacgaaatacgctgatcagcct
gcttttgtcaatatgggaacggtgatgaccttccgtaagctggaagagcgtagtcgcgct
tttgccgcttatttacaaaacgagctacaactgaaaaaaggcgatcgcgttgctctgatg
atgccgaacctgttgcaatatccggtcgcgctatttggtgtgttgcgggctggtttggtg
gcggtcaatgtcaatccgttgtatacgccccgagagctggaacaccagctcaatgatgcg
ggcatcaccacgattgtgatcgtctcgaattttgccggaaccttgcagaaaattgtgcaa
cggacagcggtgaaacatgtcattttgaccagtctggggcagatgttaccgcgggcaaaa
ggtaccgtggtcgactttgtcgtgaaatatatcaaaaaaatggtaccacattaccattta
cccgatgcggtttcgatgcgcacagccttgaaacgtggtcgtcatatgcagtacatcaag
cctgtgattgaaagcgatgatacggcttttttacagtacaccggtggaaccacggggata
gccaaaggtgcgatcctttctcaccggaacatggttgccaacgtcttacaggctaaagcg
gcttatgggccgattttgacggaagggcgtgagctggtggtgactgccttgcctctgtac
catgtgtttgcgctgagtgtgaactgtttgctatttgttgaactgggcgggcaaaatctg
ctgattaccaatccgagagatattccgggatttgtgaaagagttgcaacgctaccctgtc
acggcaattacaggggtgaatacgctgtttaatgccttggttcacaatgaatcgttccgt
catatggatttttcacagctacatttgtctgtcggtggcggaacggctgtccaacgggcg
gttgccgatgagtggaaaaaagtgacgggtatacatctgcttgaaggatatggtttaacg
gaatgttcacctttggtggccggtaacccttatgatttgagtgattacagtggcgcgatt
ggcttgccggtaccatcgacggatgtgcggattgttgatgaacatggtcaagtcattggg
tttgatcagaccggtgaattacaggttcgcggaccacaggtcatgcgtgggtactggcaa
cgggaagatgcaacccgagaagtgctgaccgacgatggttggttatcgaccggtgatatt
gttcggatggatgaccaaggtatgttatatattgtcgatcggaaaaaagatatgattctg
gtctctggttttaacgtctatccaaatgaaattgaagatattgtttccatgcatgataaa
gtgctggaagccgcagccatcgggcagccacatgatgtcagtggtgaagtggtgaaattg
tttgtcgtgaagaaagatacgtcgctgacaaaagaggaaatcattgctcactgtcgccaa
tatctgaccggatataagatcccaaaactgatagaattccgagaagagctgccgaaaact
aatgtcggtaaaatattgcgccgtgcattgaaagatgaaaatcaggtgatgttgagtatg
gaacaagcctag
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