Vibrio spartinae: Vspart_01359
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Entry
Vspart_01359 CDS
T07037
Symbol
cmdD_1
Name
(GenBank) Chondramide synthase cmdD
Organism
vsr
Vibrio spartinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
ketoacyl-synt
Condensation
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Methyltransf_31
Methyltransf_12
Methyltransf_25
Methyltransf_11
KAsynt_C_assoc
Methyltransf_23
MTS
Thiolase_N
TehB
NodS
Methyltransf_16
ACP_syn_III
Motif
Other DBs
NCBI-ProteinID:
QMV14111
UniProt:
A0A7D8B489
LinkDB
All DBs
Position
1:1486264..1495806
Genome browser
AA seq
3180 aa
AA seq
DB search
MGISSGTRKTIIDILYERANKKDSNHFGFEYEANDRQSVTRLSFAALHGQACSIARHLKH
GAISGRVLLWFPPGLSFHRAFYGCLYAGITAVPMSVPPIHPENHQRSVRRTQRTRHIIQA
ADACGILTTSALRGQLAYLQQLIPEIAALPIFFEEELTDDITAAANWQPERIHPDHLAYI
QFTSGSTGEPKGAMITHENIVQQGIGHAEVFPVPQGASSVVWLPFTHDWGLIDGVIMPVI
NGHQCYAISPASFLQRPYRWLQAISDKRAYISGGPNFAYDLCIERIRIEQLQSLDLSEWR
IAQSGAETVRPATLSDFARKFAEAGFCYESFRPAYGMAESVLVATGYHQNNVSPVALNFE
RDALNQNRAEVTGQSSDTVPLTSCGMPISSLSLKIVDPETKISLGSGQIGEVWMAGPSLA
KGYYNQPDATDETFNAYLASGEGPMMRTGDLGFLHQGHFYMTGRRKELIIIAGQNHYPQD
IETTVFEAVSGLRKNGGAAFVHHIDSQGEVLIIVQEIQSIRAVPDLETVVSAVTAAVAEV
HGIKLEALILVRPRTLPVTTSGKIERRTCCQLYLNDELQEVARWSRCDASDLDPDGRAAE
QHHRVDAARLRRWLAQAISQQTGVVQNTISDRQAFSDFGLDSRDLGSLSGALEQWLGREL
SATIFYEYPTVGALVSAMTSSGTSLAQKNISGTVGQHVAEPVAARDGIAVVGMSCRFPGA
TTPEAFWTQCLQSGNQFETIPVSRFDAGQYLQVVSQKEALSPQTIYMDKGAFIRDVEQFD
AGLFGISGREAVSMDPQQRLLLELSWQALEDAGIAPDSLSDSNTGVYIGLSNNDYQKILA
DSERVGPWGATGNATSVAAGRLSYTLGLRGPAMVVDTACSSALVAVHLACQALRNGEADV
ALVGAANLLLTPDLFQSFCAAQMLSLSGKNRSFVAGADGYIRGEGGAVLVLKPLAQAKVD
GDRVLGVLRGSAVNHDGHSNGLTAPSQQAQIELIRRAQNDAGVSPQAISYIEAHGTGTAL
GDPIELEALETVFHGRKQRLAVGSVKSQIGHLEAAAGMAGLLKALMVARHGIIPPHPEAG
QPTPIFPWDTASLMLPETEQQIEAEQRFVGVSAFGLSGTNAHIIVENIGIENAVAAESLP
AEVPTEERTGNGPYLLPISAADPRALDQLKAHYLSWMESASDTVLPDLCFSAMTTRSQFP
YRLSAFGSDLAGMCHSLERASLPESAVANEPEVIFLFSGQGSSAFAGVRELYTQFSGIRQ
IFDTGEQLAKRHGIPSLLTILFGEDEQRSVQETQWMQPALFLIEYAVAKQWQYWGVEPSL
CIGHSLGELVAACICGAMSFADGLALVIARGQLMQTHAPIGEMTVFFADSDTVTTLIRDI
DDLQIAARNAPQNTVVSGTPMALESVRNRADEQQIAYRKLPVTRAFHTEQMQQAADELAA
YVTDLTFRPLQTAMMTVSDGRHVAVGELISADYWHQQLLAPVDFYPSVQQLVEDESRWFI
EVGSGAALLSFISGMSSSAGKRCIASVSGNRGCATSLMKGLGQIWQTGVAIDWTAVLPEG
KKVALPGYPFQRQRYWPISTDLAQPTETIRETDGLTSQSDGDTESLTTSQQTLDWLRHTV
ADILLIDVQRVETQRALVPQGLDSLMAIRLIDRVKAQCGYILPIADVLGGGTLAGLTEKI
QSHISLTESTVSEDVSVTGESESGSLSSSQLRLWMLDQLSPGNPAYNLPTSIRLSGPLSV
RILEQCLTTIQQRHAVLRTSFLSGLDSEPKAVVNPVEPLSLPVTTLAAENQEEALARFAA
EEAAFPFDLFRAPLFRASLVHLSDTEHVLFLTFHHIIADGWSLGGILMPELGELYRVMSA
GQTSSLEQTITPGMKITYLAHAERQQQMMGDESFAAQREYWQMQLADLPPVVTLPPSRRR
PLTRGYQGCRRHWVMPEELAAGLKVLSHHHGVTLFMTMLAGLNVVLQRWTDQHDIVIGTT
FSERDSTSVAVFGDFTNFLPLRIQLDAQQTVASLLASVHQTCLDAFTNGHFPFDKIVAAV
NPLRQSEQHPLFAVSFVLHSFDARTRPVEMTDELTARFIPPLIQIDNNTSEADLIIEAAH
GPDGLILECEYDTELYDAALIDCFLQQYQTLLGFLVESSQTTPVAQLPVVEAGTLPGLIG
ARLQASRGESHQTIIERFDEITRHAPDHIAIRDLAGADSWSYQAVAKASERLARHLVLHG
IGPESRVGLALNPSARLIICMLAVMRVGGTYVPFDTRWPERRQQFVTQDAGLDLILHDLT
QARDADCPVLAVGPELLQGPAGPSVVLPTVNGKSAAYVIYTSGSTGMPKGVLISHENVLR
LLDCSVALFDFNNRDIWLMAHSAAFDFSVWEIWGALLNGGTLVTADPETIRDPAAVHRLL
HEEKVTVFNQTPSAFRAFSREHLSRQSHLSDLRLIIFGGEALDLQMLEPWIEIYGDQQPR
LCNMYGITETTVHNTFHFIGRDELNTLGVIGMPLADRELYLLDESLYPVPHGIVGEIYIG
GGGLAQGYLGRPALTAERFVPHPFSPEPGERLYRSGDLGRYLPDGKLIYVGRADHQVKIR
GFRIEIDEIRMVLNQYPQVIDSVVLAEQDHDDTALIAYVVPEPTSSGQSEAIDGWRHVFD
ETYASQHDLGPEMLNISGWHSSYDGHPIPAEEMKEWVDQTVLRIQALKPKRVLEMGCGTG
MILLRLAPDCHDYTGMDISATALEYIAGVLSRNRFDHEQITLQQGAADDFSSIAPSSVDT
VILNSVVQLFPSIDYLEQVIAGALSRLSPQGTLFIGDVRHYGLHALFHLSVLDFQNKAVG
SDLAERLVSRCQEDKELLVAPDYFYQLKQRYPQIRQVEVRLKTTWGENEMSRFRFDVVIQ
CGPALSAPVKCDWLPCPEDQHALRTMLSQSQKTLFGVRNIPNQRLHRWVRMMARAELNGS
GEADLYCDQQAFHPAEIVEMAASLNWTAQILWTGNNADGCFDAVFIQRDRTSDPEQVVIQ
NLVADHGGTAAWQTQANVPDLGLVSQQQIAEMRRHLEAHLPSYMIPELVPVAGLPLSGNG
KIDTARLKQLRRQRVVSSETFVAPQDALQEAIAEEWREVLDLTKIGVKDNFFELGGHSLK
ATQLVARLQERFSIDVPLSAIFTAPTIEEQHSIILEQLTRLAQETEYDSDDISLRDVSMR
NT seq
9543 nt
NT seq
+upstream
nt +downstream
nt
atgggtatatcatctggaaccagaaagacaattatcgatattctgtatgagcgtgcgaat
aagaaagatagcaatcacttcggcttcgaatatgaagcaaatgaccgtcagtccgttacc
cgcttaagctttgcagcattgcatgggcaggcttgttctattgcccgacatctgaaacac
ggcgcgatttcagggcgtgttctcctctggtttcctccgggactatcttttcatcgtgcc
ttttatggttgtctgtacgctggtataacagcggtcccgatgtccgtccctccgattcat
ccggaaaaccatcaacgttcggtgcgccgtacccagcgtaccagacatattattcaggct
gctgatgcttgtggaatactgacgacatcggcattacgagggcagctcgcttatctacaa
cagctcattccagagatagcagccctcccgatttttttcgaagaagagcttaccgacgac
atcactgccgctgcaaactggcaaccggagcgaattcatccggaccacctggcttacatt
cagtttacctccggctcaacgggagagccgaaaggagcaatgatcactcacgagaatatc
gtgcagcaagggatcggacacgcggaagtttttcctgtgccacaaggcgcatccagcgtt
gtctggttaccttttactcatgactgggggctgattgacggtgtcatcatgccggtgatc
aacggtcatcaatgctatgctatttctcctgcttcatttctacaaagaccctatcgctgg
ttacaggcaatctctgacaaacgggcatatatttcaggtggacctaactttgcttatgat
ctttgtattgagcgtatccggatagaacagcttcagtcccttgatttatcagaatggcgt
attgcgcagagcggggcggaaaccgttcgtcccgcgacattgtcggattttgcacgaaaa
tttgccgaagccggtttctgctatgaaagtttcaggccagcttacggtatggcggaatct
gttctggttgccaccggatatcatcagaacaatgtgtctccggtggcacttaattttgaa
cgggatgcgctcaatcagaaccgggctgaagtgacaggacaaagttcggatactgttccg
cttaccagttgtgggatgccaatctcatcactctcgctgaagattgtcgatccggagacg
aaaatatcactgggatctgggcagattggagaggtctggatggcaggaccttctctggcg
aagggatactataaccaaccggatgcgacagacgagacgtttaatgcctatctggcgtcg
ggcgaagggccgatgatgagaactggtgatctgggatttttgcaccaaggccatttttat
atgacaggacgccgtaaagagctcattattattgccgggcagaatcactatcctcaggac
attgaaacaaccgtttttgaagctgtgagtggccttcgaaagaacggaggcgcagccttt
gtccaccacatcgactctcaaggagaggttctgattattgttcaggaaattcagtctatt
cgcgctgtgcctgatctggaaacagttgtgtcggcagtaacggctgcggtcgctgaagtt
catgggattaagcttgaggctctgatacttgtccggccgcggacactcccagtgacaacc
agtggcaaaatcgagcgcagaacctgttgtcagttatatctgaatgatgaattacaggaa
gttgcccgttggtcgagatgtgatgcctccgaccttgatcccgatggtcgggctgccgag
cagcatcatcgtgttgatgctgctcgtttacggcgatggctggctcaggccatttcacaa
cagacgggtgttgtgcagaatacgatcagcgacagacaagcattttcagattttggtctg
gactctcgtgatttggggagtttgtccggagcgctggaacagtggcttggacgtgaactg
tcagcgacaattttttatgaatacccgaccgtaggggcgctggtctctgcaatgacaagc
tcgggaacatcattggcacaaaaaaacatctcgggcacggtcggacaacacgttgcggag
cctgttgcagcccgtgatggcattgctgtggtcggaatgtcgtgtcgtttccccggggca
acgacaccggaagcattttggacgcaatgtctgcaaagcggtaatcagtttgagacgatc
cctgtttcccgcttcgatgcaggacaatacttgcaggtggtaagtcagaaagaggcgctt
tcaccgcagaccatctacatggacaaaggtgcatttatccgtgatgttgagcaatttgat
gcaggattgttcgggatttccggccgggaagccgtgagtatggacccacaacagcggtta
ttactggaattgtcctggcaggcgctggaggatgcggggatcgctccggattcattaagt
gacagtaatacgggtgtctatatcggattaagcaacaacgattaccagaaaatcctggcg
gacagcgagcgggtcggtccgtggggagcaacaggcaatgcgaccagtgtggcagccgga
cgtctctcttataccctcggattgcgtggccctgcgatggtggtagataccgcatgttca
tcagcgttggttgctgttcatcttgcttgtcaggccctgcggaacggagaagctgatgtg
gccttggtgggagcggcaaatctattgttaacgccagatcttttccagagtttctgtgcg
gcacagatgctgagtttgagtggaaaaaatcgctcgttcgtcgcgggtgccgacgggtat
attcggggagaaggtggtgctgttctagtgctgaaacctctggctcaagctaaagtggac
ggggatcgggttttgggcgtacttcggggaagtgccgtcaatcatgacggtcattccaac
ggattgacggcaccgtcacaacaggctcaaattgaattgattcggcgggctcagaatgat
gctggtgtgtctccgcaggcgatcagttatatcgaggctcacggtactggaacagcattg
ggcgatccgatcgaattggaagcattggagacggtgttccatggccgtaaacagagactt
gctgtgggatcggtcaaatctcagatcggacatctggaagctgccgctggtatggccggt
ttgctcaaagcgttgatggttgcccggcatgggatcattccacctcatccggaagccgga
caaccgactcctatttttccctgggatacggcctcattgatgttacctgagaccgagcag
cagatcgaggccgagcaacgtttcgtcggggtcagcgcattcggtctgagtgggaccaac
gcgcacattattgttgaaaacatagggattgaaaatgctgttgcggctgagtcattgcca
gcagaagtacctacagaggagcgaactggaaatggcccttatctgctgccgatttctgcg
gcagatccacgggcactcgaccagttaaaagcacattatctgtcatggatggaaagcgct
tcggatacggtgttgcctgacctctgtttcagtgcgatgactactcgatcccagtttccg
taccgattgtcagcgttcgggagcgatcttgccgggatgtgccactctctggaaagggca
tctctgccggaaagtgccgtcgcgaacgaacccgaggtcatctttctattctcgggacag
ggcagttcggcgtttgccggtgttcgtgagctttatacacagtttagtgggatccgacaa
atattcgataccggtgagcagctggcgaagcgacatggcattccttcattgctgaccatt
ctgttcggcgaagatgaacaacgttctgtacaggaaacgcagtggatgcaaccagcgctg
tttctgattgaatatgcggttgcgaaacagtggcaatactggggtgttgagccgtctctt
tgtatcggacatagtctgggagaactggttgctgcctgtatctgcggtgcaatgtcattt
gccgatggtttagcactggtgattgctcggggacaattaatgcaaacccatgccccgatc
ggagaaatgacagttttcttcgcggattcagataccgtaacgacgttgatccgcgatatt
gacgacctacagattgctgctcggaatgccccgcagaatacagtggtttccggtacacca
atggcactggaatctgtacggaaccgggcagacgaacaacaaattgcctatcggaaattg
ccagtcacccgggcatttcacacggagcagatgcaacaggcagccgacgagttggctgct
tatgtcaccgatctgactttccggccactccagacggcaatgatgaccgtctccgacggt
cggcatgtggcagtcggcgagctgatatctgccgattattggcatcaacaattactcgcc
ccggtcgatttttatccatctgtacaacagcttgtagaagatgagtcacgttggtttatt
gaagtcggatcgggagcggcactgctctcttttatcagcggtatgtcttcctctgccggg
aagcgctgtattgcgtccgtgtccggtaaccgtggatgtgcgacatcgctgatgaaaggg
ctcggtcagatttggcagactggcgtggcgatcgactggacggctgttctccccgaggga
aagaaagttgccttgccgggttatcctttccaacgtcaacgctactggccgatatcaaca
gatctggcacaaccgactgaaacgatacgagagactgacggtttaacatctcagagcgac
ggtgatactgagtctttgaccacttcgcagcagactcttgactggcttcgtcataccgtt
gccgatattttgctgattgatgtacagcgagtggaaacgcagcgtgctctggtacctcag
ggactcgattcattgatggctatccgtttgatcgaccgggtaaaagcgcaatgcggttat
atcctgccgatagcggatgtcttaggcggcggaacgctggcgggtctgactgaaaaaatt
cagagccatatcagtctgacggaaagcaccgtgagcgaagacgtttcggtcacgggggaa
tctgaaagtggttcgctctcttcctctcaattgcgtctttggatgctggaccagctatct
ccggggaaccccgcttataacttacctacctcgattcgtttgagcggtccgctttcagtc
aggattttggaacagtgcctcactactattcagcagcgccatgcggtccttagaaccagc
ttcctgtccggactcgatagtgaaccgaaagcggtcgtaaatccggtagagccattgtcg
ctgcctgtgaccactctggcagcagaaaaccaggaagaagcactggcccggtttgctgcc
gaagaagcagcatttccttttgatttgttccgggcgccgttgttccgtgcatcactggtt
cacttgtccgacacggagcatgtgctgtttttaacatttcatcacattattgctgatggc
tggtcgttaggcgggattctgatgcccgaacttggggagctttaccgagtgatgtcggca
ggacaaaccagttcgttggaacagacaattacaccgggaatgaaaataacttatctggct
catgcagaacgtcaacagcagatgatgggagatgaatcctttgcggcacagagggagtac
tggcagatgcaattggccgatttgccgccggtcgtaactttaccaccgtcccggcggcgt
ccgctgacccgaggttaccaaggatgccggcgtcattgggtgatgccggaggagctcgcc
gctgggttaaaagtgttatcccatcatcacggagtcactttatttatgaccatgttggca
gggctgaatgtcgtgttgcaacgctggactgatcagcatgatatcgtgataggtaccact
ttctccgagcgagattccacatcggtcgctgtgtttggcgatttcaccaatttcctgccg
ttacggatccagcttgacgcacaacagacagtggcgtctctacttgcttcagtacatcag
acttgtctcgacgcatttaccaacgggcatttcccgtttgataaaattgtggcggctgtc
aatccactccgccagtctgagcagcatccgctttttgcagtttcgtttgtcttgcatagt
tttgatgcccggacgcgtccagtggaaatgacagatgaactgacggcccgttttattccc
ccgctcatccagattgacaataacacttctgaagccgatttaattatcgaagcagctcat
ggtccggatggtctgattctcgaatgtgaatatgacaccgagctgtatgatgccgcactg
atcgattgtttcttacagcaatatcagactctgttgggatttctggttgagtcatcgcaa
actacaccagtcgctcaattaccagtggttgaagccggaacgctacccggactgattgga
gcgcggttgcaagcgtcacggggtgagtcccatcaaactattatcgaacgatttgatgag
atcacccgacatgcccctgatcacattgcgattcgggatcttgccggcgcggactcttgg
agttatcaggcggttgccaaagcatcggaacggcttgcccgacatctggttctgcatggt
atcggaccggagagccgggtcggcctggcgctgaatccgtccgctcgtttaattatatgt
atgctcgcagtgatgcgggtcgggggcacttatgtgccattcgatacacgctggcctgag
cgcagacagcagtttgttacgcaagatgcaggtctggatctgatccttcatgatctgact
caggccagagacgctgattgtcctgttttggctgtggggcctgaactgctgcaaggccca
gctggaccttcggtggtgttgccgaccgtgaatggaaagtctgcggcctacgtcatttac
acctctggttcgacggggatgccgaaaggggtcctgatctcgcatgaaaatgtgctgcgt
ctattggattgttcggtggctctgttcgatttcaataaccgggatatctggttgatggcc
cattcagcggcatttgatttctcggtttgggaaatctggggagctctgttaaatggcggt
acgctggtgacggccgatcctgaaactattcgtgatccggcggctgtccatcgtttgctt
catgaagagaaggtgaccgtatttaaccagacgccttcggcattccgtgccttttcccgt
gaacatctgtctcggcagtcacacctgagtgatcttcgtctgattatttttggtggagaa
gcgctggacttacagatgcttgaaccttggatcgaaatttatggtgatcagcagccacgt
ttgtgcaatatgtacggtattacggagacgacggtacacaataccttccactttatcggg
cgtgatgagctgaatacactcggtgtgatcgggatgcccttggctgaccgggaattgtat
ttgcttgatgagtccctgtacccggttcctcacgggatcgtcggggaaatttatatcgga
gggggaggccttgctcaagggtatctgggccgacctgcgttgaccgccgagcgatttgtt
ccgcatccttttagtccagagccgggagagcggctgtaccggagcggtgatttaggccgt
tacttgcctgacggaaaactgatctacgttgggcgggcagatcatcaggtcaaaattcgc
ggattccggattgaaatcgatgaaatccggatggtgctcaatcagtatcctcaggtgatc
gacagtgtggtgttagccgaacaggaccatgatgacacagcgttgatcgcttatgtggtc
ccagaaccaacgtcatcggggcaaagcgaagcgatagacggatggcggcatgtttttgat
gaaacttatgcatcacagcatgatctcgggcccgaaatgttgaatatttcgggatggcac
agcagttatgatggtcatccaattcctgccgaagagatgaaagagtgggtcgatcagaca
gtgctacggattcaggcgctgaaaccgaagcgtgtccttgaaatgggatgtggaactggc
atgatcctattgcgtttggcaccggattgtcacgactacactggtatggatatttctgcg
acggcactggaatatattgccggtgttttaagcaggaatcggttcgaccatgaacagatt
accttgcaacagggcgcggctgacgatttttcctctattgcgcccagtagcgttgatacc
gtaattcttaattccgttgtgcaactgtttcccagtatcgattatttggagcaggttatt
gccggcgccctctcacgtttgtctcctcagggaacgctgtttatcggtgatgtccgtcac
tatggattgcatgccctgtttcatttgtccgtgctcgattttcagaataaagcggtggga
agtgatctcgcggagcggttggtcagccgctgtcaggaagataaagaattactggttgct
ccggattatttttaccaactgaaacaacgttatccgcagatccggcaggttgaggttcgg
ctgaaaacgacatggggtgaaaacgaaatgagccggttccgctttgatgtggtgatccag
tgtggcccggcgttgtcggcaccggtcaaatgtgactggttgccgtgtcctgaggatcaa
catgcgcttcgcactatgctgagtcagagtcagaagacgttgttcggtgttcgaaatatt
cccaaccaacgcttgcatcgttgggttcggatgatggcccgggctgaactgaacgggtcg
ggtgaagcggacctatactgtgatcagcaagcgttccatccggctgaaattgttgagatg
gcagcatcgctgaactggactgcccagattctctggaccggaaacaatgctgacggctgt
tttgatgcagtctttattcagcgtgacagaacgtccgatcctgagcaggttgtcattcaa
aatctggttgcggatcatggcgggaccgccgcatggcagactcaggccaatgttccggat
ctcggtctggtcagtcagcagcagattgcagagatgcgtcggcatctggaggcgcacctg
ccatcgtacatgattccagaactcgttccggtggccggattaccgctctcgggcaacggc
aagatcgataccgctcggttaaaacaacttcgtcgacaacgggtcgtttcatctgaaacg
tttgtcgccccgcaggatgctctgcaagaagctatagctgaggaatggcgcgaggttctc
gatctgacaaaaatcggtgtgaaagacaacttctttgagctgggcgggcattcactcaaa
gccacacaactggtggctcgacttcaagagcgcttcagtatcgacgttccgctcagtgcc
atttttactgcgccaaccattgaggaacaacattcgattatccttgaacaactgacccga
ctggcgcaggaaaccgaatatgacagcgacgatatttccttacgtgatgtatcgatgcga
taa
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