Vibrio spartinae: Vspart_01789
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Entry
Vspart_01789 CDS
T07037
Symbol
cycB
Name
(GenBank) Cyclodextrin-binding protein precursor
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
vsr
Vibrio spartinae
Pathway
vsr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vspart_01789 (cycB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsr02000
]
Vspart_01789 (cycB)
Transporters [BR:
vsr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
Vspart_01789 (cycB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QMV14533
LinkDB
All DBs
Position
1:complement(1987386..1988621)
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AA seq
411 aa
AA seq
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MNNNKFSKKISALAVTALFCSPMVLAQQSLLVWEDIQKSFGNEEAVAAFEKQHDVNVKVL
EMPYGGQVESLRMDGPAGTGPDVVLIPHDQIGGAVIQGLLAPVQVDKAVTDTFTQSSIDA
LTYNGVLYGLPKSVETLFMVYNKDLIAKLPDTMDEIFELSKTFRKENKYGLLAKWDELYY
TYGILNGMGGDIFGKKADGSYDPDKILLNTPGAIEGAKFIQKFYQSKVFPTGIIGNNGLN
AIDSLFTSGKAAIVETGPWSLQPYKEAGINYGVAPLPKLPSGQPMGSFMGVKSYSISTFS
KNKPLAQAFITFINNYENAKHRFELTGEVPAVKKLVNDPVIKNDPGASAVAIQSIHATSM
PSIPEMNEVWGPANSALQLIATNKQDPKSALDSAVESIQMQIEANHAMMGQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataaatttagtaaaaaaatatctgctctcgcagtgacggctctattctgt
tcgccaatggtgttggcgcagcaatccttattagtctgggaagacattcaaaagtctttt
ggtaatgaagaagcagttgcagcatttgagaaacaacacgatgtgaacgtgaaagtgctt
gaaatgccatacggtggtcaggttgaatctctgcgtatggacggcccggcgggtaccggt
cctgacgttgttttgattccccatgatcagattggcggggccgttattcaggggctgctt
gctccggttcaggtcgataaagcggttaccgatacctttacgcaatcttcgattgatgca
ttgacatataatggtgtgctctacggcttgccaaagtcggttgaaacattatttatggtg
tacaacaaagaccttattgcgaagctcccggatacgatggacgagatatttgagctgtcg
aagacgtttcgcaaggaaaataaatacggtttgttagctaaatgggatgagctttattac
acctatggcattttaaacgggatggggggcgatattttcggtaaaaaagccgacggttct
tacgaccccgataaaatattactgaacactcccggggcgatagaaggcgcaaaattcatt
cagaagttctaccagtcgaaagtctttccgacgggcattattggcaataacggactgaat
gctattgattcattattcacttcgggcaaagccgcgattgttgaaacgggcccttggtcg
ctccagccgtataaagaagcgggcatcaactacggtgtcgcaccacttccgaaattgcca
tctggtcagccaatgggatcatttatgggggtgaagagttacagcatttccaccttctcg
aaaaacaaaccactcgcgcaagcatttattacgttcatcaataattatgagaatgccaag
caccgctttgagctgaccggtgaggttccggccgtgaaaaaattggtgaacgatccagtc
atcaaaaatgacccgggtgcaagtgcggtcgcgattcagtccatccacgcgacttcaatg
ccttccattccagaaatgaatgaagtctggggaccagccaacagcgccttgcagttgatt
gcgaccaataaacaagatccgaaaagtgcactcgactctgcggtagaaagcatccaaatg
caaattgaagccaaccacgcaatgatgggtcaataa
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