Vibrio spartinae: Vspart_01890
Help
Entry
Vspart_01890 CDS
T07037
Symbol
wapA_6
Name
(GenBank) Cell wall-associated polypeptide CWBP200
Organism
vsr
Vibrio spartinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
SdrD_B
SpaA
CUB_CDCP1_2
OCRE
CarboxypepD_reg
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
QMV14629
LinkDB
All DBs
Position
1:complement(2106474..2111228)
Genome browser
AA seq
1584 aa
AA seq
DB search
MSEQQQFYNYINQQLNSFPDLLTDYRQMTKKIYFQTADAFSAWQDLPSLFSMDKQLKVSG
ESTTVGKDDANYTTKVSCPLSGNLEIQSVFQSIYHVPLGGIDAIIKAEDGSETRTVTLDA
EGKATVTDLTPGKYYEVVINNKPTPAEMDSLFSHYDELSGDLVSWLNGKWKTFKPEWDSY
FTNTAAQSVLSVIRHFADGIWKALKELWDGIGEIYDMLKDPKKALKDMVDGASDIIDAIK
NAASSAPDMLEKALLFASDEAALYLFVRAMMAYISMVPLAGMLNKLAEMGGNALAGVLLG
LLGGVIVTFIATPATGVAYATYRAVKTAGVAIKKVIQPLLNVIGEIFAFAKKLILKACDK
FKRIAMNRGGRGTYRNGKLEFEANNRPNTKLHGDHDALPDDSHAPTNESGRSTQDSKGTV
CDKDPISMATGEELLSLTDGHLIGLLPFEWQRLYRTAAVETHVGLGYGWSHSLSHQLTVD
GDAIIWRDGEGKLTRFPRPTEQLPAITNRMAKSAAFLGSDKQQMIIASGERFYTFKMRGD
SGLLTSIKDQYDHSLSITYDRQHRPVRISTETNLRFELVYTDDLITQVDLYAYLAEQDEW
QFVQTQVSYGYNAQSQLITATNASGETERYTYDAQHVIQSRELAGGAVFRWEWQGEGKDV
RAVRQYSNLTQVDTRYDWDEDAGTVTLTNSDGSQQVYQHDDNARLIKEVDGSGGEYLKAY
DDKGRLTKETDALGNVTESVYNDAGELVAKVEPNGLTTHFSYKNGLLALVQQDKAVWRYR
HDRWGHITEQSDPLGHTTTYDYNDHGLIEKITYPDGGIHQLTWNRNGHLVDETTPQGEVI
RYRYDILGRLRLRHDSQGVTELSYDRSGRLTKQVLPGGQTRFYEYNAYNKVTKFTDEQGR
ATTYDYEFPLHLVTQKTNPDGSTVQYRYDNPFHFVSAIINERGEHYQIDYLPTGHVQREV
TFDGRQFVYEYDAHTQLTAKTEIGSEGTELTTRYAYDAQGKLIEKTLPDESTVQYSYDLL
GNLTGVDDGRWPLAYDYDVLGRLTTEHQGWATTGYRYDALGHITAQLLPDGQQLDYDFRH
GRLHQVNLNGHCLTQHQYQVSGLETRRTQGALSSHFQYDETGRLTEHRVSQAQQQTLFRR
YQYNRSGNLTQVEDNLRGLTQYHYDPLDRLTQVRGSLSENFAHDPAGNLIQSRQSNVAGN
RLLFQGDRHYQYDEFGNLIQEARGTNQSLITRYQYDGQHRLTHVEKPDGTIAEYQYDAFG
RRTHKTVTDKTGHQTTTEFLWQGDKLLAESGERHYQTYLYEYGSFKPLALVTGEGADNAT
PYFYHLDQIGTPLEITDAEGGVAWSVDYHSYGNVAYQRKADIVSPLRFQGQYYDEETGLH
YNRHRYYSPDSGRFITPDPIGLAGGLNNYQYVKNPTGWIDPLGLSQCAGSCAGGGSVSTK
PNNDYNWQGKKVETYTGHQWSPLDPAMSEPPIVNYGPFTDAQRKAFLKGKSGGTKIAPHH
RHQLPVETHGGVIDELRGPGHPDGNNHTALVDGLNRHPGESYFNKTDGGQSQRAREIREH
FRQKGTRLVAHPTENGMWVDPSPK
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaacaacaattttataattatatcaatcagcagttgaacagctttcctgat
ttgttgactgactatcggcaaatgaccaagaaaatttattttcagactgcggatgctttt
agtgcatggcaagatttaccgtcactattttcgatggataaacagctcaaagtcagtggc
gagagtaccacggtgggcaaagatgatgcgaattataccaccaaggtgagctgtccgctc
agcggcaatctggaaatccaaagtgtctttcaatcgatctaccacgtgccgttaggcggc
attgatgcgattatcaaagccgaagacggcagtgaaacccgaacggtaacccttgatgcc
gaggggaaagcgaccgtcaccgacctgaccccgggtaaatactatgaagtggtgatcaat
aacaaaccgaccccggcagagatggactcgctgttttcccattatgatgagctgagcgga
gatttggtgagctggctgaacggcaagtggaagacgttcaagccggaatgggacagctat
tttaccaataccgcagcgcagtcggttttatcggtgatccgccattttgctgacgggatc
tggaaagccttaaaagagctgtgggatgggattggtgaaatttatgacatgcttaaagat
cccaaaaaagcgctgaaggatatggttgatggtgcttctgatattattgacgcgattaag
aatgctgccagcagtgcgccggatatgctggaaaaagcgttgttatttgcctcggatgaa
gccgcattatatttgttcgtccgggcgatgatggcttatatctcgatggtgccgctggcg
gggatgttgaataaactggctgaaatgggtggcaatgcgctggccggcgtgttgttaggg
ttactcggtggtgtcatcgtgacctttattgctacaccggcgacgggagttgcttatgcg
acctaccgggcagtgaaaaccgcgggtgtggcaattaaaaaagtgatccaaccgctgttg
aatgtgattggagaaatctttgcctttgctaagaaactgattttgaaagcctgtgataaa
ttcaaacggattgcgatgaaccggggtggtcggggtacttatcgcaatggcaaacttgaa
tttgaagccaataaccgaccgaataccaagctccatggcgatcatgatgcactgccggac
gacagccatgcgccgaccaatgaatccggtcgctcgacccaagacagtaaaggcacggtg
tgtgacaaagacccgatatcgatggcaaccggtgaagagttactgtcgctgaccgacggc
cacctgattggtctgttgccgtttgaatggcaacggttgtaccggaccgctgcggttgaa
acccatgtcgggctcggttatggctggtcacattcactgtcacatcagctgaccgtggac
ggtgatgcgattatctggcgggacggcgaaggcaaactgacccgtttccccagaccgaca
gagcaattgccggcgattaccaaccgcatggcgaaatcagcggcatttctgggtagtgat
aaacagcagatgattattgccagcggtgagcggttttatacctttaaaatgcgtggtgac
tcgggcttactgacgtctatcaaagaccaatatgaccattcactgagcatcacttacgac
cgtcagcaccgtccggtccggatttcaaccgagaccaaccttagatttgagctggtgtat
acggatgacctgattacccaagtggatttgtacgcttatctggctgagcaggacgaatgg
caatttgttcagacgcaagtcagttatggctataacgcgcagtcgcagctcatcaccgcc
accaatgccagtggggagaccgagcgatatacctacgatgcccaacatgtgattcagtcg
cgcgagctggccggtggtgcggtgttccgctgggaatggcagggcgaagggaaggatgtt
cgggcggtgcgccagtacagtaacctgacgcaggtcgatacccgctatgactgggatgaa
gatgccgggacggtgacgctgaccaacagcgacggctcgcagcaagtttaccagcatgat
gacaacgcgcggctgattaaagaagtggacggcagcggcggggaatacctcaaggcctac
gatgacaaagggcggttgactaaagaaaccgatgccctcggcaatgtcaccgaatcggtg
tacaacgatgccggtgagctggtggctaaagtcgagcccaatggtttaaccacccatttc
agctataaaaacggtttactggctctggtgcagcaggacaaagcggtgtggcgttaccgg
catgaccgctggggtcatatcaccgagcagagcgacccgctgggccataccaccacttat
gattacaacgaccacggcctgattgagaaaatcacctatccggacggtggcattcaccaa
ctgacatggaaccgcaacggtcatctggtcgatgagaccaccccacagggggaagtgatt
cgttaccgctacgatattctggggcggttgcggctgcgtcatgacagtcagggcgtcacc
gagctgtcgtatgaccgcagcggccgattgaccaaacaggtgttgccgggcggtcagacc
cgcttttatgaatacaacgcctacaacaaggtcaccaagttcaccgatgagcagggcaga
gccaccacctacgattatgagttcccgctgcatctggtgacgcagaagaccaacccggac
ggcagtacggtccagtatcgttatgacaacccgttccactttgtcagtgccattatcaat
gagcgcggtgagcactatcagatagactacctgccgaccggccatgtgcagcgggaagtg
acgtttgacggtcgtcagtttgtctatgaatatgacgcgcacacccaactgacggcaaaa
accgaaatcggcagtgaaggcaccgagctgacgacccgttacgcgtatgacgcacagggc
aagctgattgagaaaaccctgccggatgaatcgacagttcagtacagctatgacttactc
ggcaatctgaccggtgtggatgatggtcgctggccgctggcgtatgactatgatgtgctg
ggccggctgaccaccgagcatcagggctgggcaaccaccggttatcgttatgatgcgctg
ggccacatcacggctcagttactgccggacggccagcagcttgactatgacttccggcat
gggcggctgcatcaggttaatctgaacggtcactgcctgacacaacaccaatatcaggtc
agtggtctggaaacccgccggacacagggggcgctgagcagtcattttcagtatgatgaa
accggtcgcctgaccgagcatcgggtcagtcaggcgcagcaacaaacgttgttccgccgt
tatcagtacaaccgctcggggaacttaacgcaggtggaagataacctgcgtggcctgaca
caatatcactatgacccgttagaccgcctgacgcaggtgcgcggcagcctgagtgagaac
tttgcccacgacccggctggtaacctgatacagagccggcagagtaatgtggcggggaac
cggctgctgtttcagggggaccgacactatcagtatgatgagtttggtaacctgatacag
gaagcgcgcggcaccaatcagtccctcatcacccgctatcaatacgacggccagcaccgc
ctgactcacgttgaaaagcccgacggcactattgctgaataccaatatgatgccttcggc
agaagaacccataaaacggtcactgacaaaaccggtcaccagaccaccactgagttttta
tggcagggtgacaaactgctggccgaatcgggtgagcgtcactatcagacttatctgtac
gaatacggcagctttaaaccgctggcactggtcaccggtgaaggggcggacaacgcaacc
ccgtacttctaccaccttgaccaaatcggcacgccgctggaaatcaccgatgcagaaggc
ggtgttgcctggtcggtggattaccacagttacggcaatgtggcttatcagcgcaaggcc
gacatcgtcagcccgctacgttttcaggggcagtattacgatgaagaaacgggtttacat
tacaaccgccaccgttactatagccctgactccggtcggtttatcaccccggacccgatt
gggcttgcgggtggattgaataactaccagtatgtgaaaaatccgaccgggtggattgac
ccgctggggttgagtcagtgtgcggggagttgtgcggggggaggaagtgtttcgaccaag
ccgaataacgattataattggcaaggaaagaaagtggaaacgtatactggtcatcagtgg
agtccacttgatcctgctatgtctgaacctccaatagttaattatggtccgtttactgat
gcacagagaaaagctttcttaaaaggtaaatctggaggtacgaagattgctccgcatcat
cggcatcagttgcctgtagagactcatggtggggttattgatgaattgagaggtccaggc
catcctgatggtaataatcatacggctttagttgatgggttaaatcggcaccctggtgag
tcgtattttaataaaactgatggtggtcaatctcagagagccagagaaattagagaacat
tttaggcaaaaaggcacaaggcttgtagctcacccaacagagaatggtatgtgggtagac
cctagtcctaagtaa
DBGET
integrated database retrieval system
