Vibrio spartinae: Vspart_01907
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Entry
Vspart_01907 CDS
T07037
Symbol
soxB_2
Name
(GenBank) Sarcosine oxidase subunit beta
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00260
Glycine, serine and threonine metabolism
vsr01100
Metabolic pathways
Module
vsr_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Vspart_01907 (soxB_2)
Enzymes [BR:
vsr01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Vspart_01907 (soxB_2)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Vspart_01907 (soxB_2)
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Gene cluster
GFIT
Motif
Pfam:
DAO
FAD_binding_2
Thi4
NAD_binding_8
FAD_oxidored
Pyr_redox_2
Pyr_redox_3
FAD_binding_3
Trp_halogenase
MCRA
Motif
Other DBs
NCBI-ProteinID:
QMV14646
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All DBs
Position
1:complement(2132810..2134063)
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AA seq
417 aa
AA seq
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MERYSGFGLLKHSLAYHENWQRVWRNPKPKKKYDVIIIGGGGHGLATAYYLAKVHGITNV
AVIEKGYLGGGNTARNTTIVRSNYLWDEAAHLYEHAMKLWEGLSQDLNYNVMFSQRGVLN
LGHTLQDMRDIERRVNANRLNGIDGEVLDAKQVKEIVPHMDCSQNRRYPVMGASWQPRGG
VARHDAVAWGYARGADSYGVDLLQQCEVTDMVIEDGAIVGVKTNRHGIIKANRVGCVTAG
NSGVMAKMAGFDMPLESHPLQALVSEPIKPIIDTVVMSNHVHGYVSQSDKGDLVIGAGID
GYNGYGQRGSYHTIEHTLQAIVELFPIFSRVRMNRQWGGIVDTTHDACPIISDTPVENLF
FNCGWGTGGFKATPGSGHVFAETLAKGEANALAKPFSMFRFHDGSLVDEHGAAGVAH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagcgttattctggatttggactgttgaagcacagtctggcctatcacgaaaactgg
caacgtgtttggcgtaatcccaaaccgaagaagaaatatgatgtcattatcatcggcggc
ggcggtcacggtttggcgacagcttattatctggcgaaagtgcacggcattaccaatgtt
gccgtgattgaaaaaggttatctgggcggtggcaataccgctcgtaacaccaccatcgtt
cgttcgaactatctatgggatgaagccgctcatctttatgaacatgccatgaaactctgg
gaaggattgtctcaggatttgaattataacgtgatgttctctcagcgtggcgtgctgaat
ctcggtcataccctacaagatatgcgtgatattgaacgacgggtcaatgcgaaccgtctc
aacggcatcgacggtgaagtgttggatgccaaacaggtcaaagaaattgtaccgcacatg
gattgttcacagaatcgtcgttaccccgtgatgggggcctcgtggcaaccccgaggcggg
gtcgcccgtcacgatgccgtcgcatggggttatgcccgtggtgcggacagttacggtgtg
gacttgctccaacagtgtgaagtcaccgatatggtgattgaagatggtgccattgtcggg
gtgaaaaccaaccgtcacggcatcatcaaagcgaaccgagtgggttgtgtcacggccggc
aactcgggcgtgatggcaaaaatggctggctttgacatgccgcttgagtctcacccgttg
caagcgttggtctctgagccgattaaaccgatcatcgacactgtggtgatgtctaaccac
gtgcatgggtatgtcagtcagtctgataaaggtgacttagtcatcggtgcgggtatcgat
ggttataacggttacggacagcgtggctcatatcatacgattgaacatacgcttcaggcg
attgttgagctcttcccaatctttagtcgtgtccgcatgaaccgtcagtggggcgggatc
gtggataccacacatgatgcctgtccgattatctcggatacgccggtcgagaatctgttc
ttcaactgtggttgggggacagggggctttaaggcgactcccggatccggacatgttttt
gctgaaacactggcaaaaggtgaagcaaatgcgttggcaaaaccattctcaatgttccgt
ttccatgatggttcattggtggatgagcatggcgcagcgggcgtagcacactaa
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